Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1703 ATGGCTACCCAAATTTGTCTAAGTCTGTATATCTCCTGCATTATTACACTCCTTCATATTATTGTTTCCACATTGGCTAGCTCTGATAACTATATCATCCACATGGACTTATCAGCCATGCCTAAACCATTCACCAACCATCATAGTTGGTATCTATCCACTCTTTCCTCTGCATTGGACAATACACAATTTAACTTTGCCTCTTCCAAGATTATTTACACATACACCAATGTCATGAATGGTTTTAGTGCAAGTTTATCACTTGCAGAGCTAGAAGCTCTCAAAACCACTCCAGGTTACATTTCGTCCATACAAGATATACCGGTGAAGCTCGACACCACACACTCACCGCAGTTCCTCGGTCTCAATCCCCACGTTGGCGCGTGGCCTGCCGGTGAGTTTGGCAGAGATATCATAGTCGGTATGGTGGATAGTGGAATTTGGCCTGAAAGTGAAAGCTTTAAAGATAATGGGATGACAAAAATTCCTTCACGCTGGAAAGGCCATTGTGAAAACAGCATCCATTGCAACAAGAAACTCATTGGAGCTCGGTTCTTTAGCCGAGGATTGCTGTCAAAAAACCCCAACATCACCACAGCTTTGAACTCCACCCGTGACATGGACGGTCACGGGACTCACACTTCAAGCACTGCTGCCGGGAGCCGAGTTGACGGTGCGTCCTACTTTGGTTACGCAGCTGGCTCAGCCACTGGAATAGCCTCACGAGCCAGGGTAGCCATGTACAAGCCGTTTTGGGATGAAGGTGCATACTCATCAGACATAATAGCTGCAATTGACAGTGCAATATCGGACGGTGTAGATGTTCTTTCATTGTCATTCGGCTTCAATGATATCCCCTTGTACCAAGACCCTATTGCCATAGCCACATTTGCAGCCATGGAGAAAGGCGTTTTCGTGTCCACGTCGGCCGGGAACGATGGTCCCTTCCTTAAAACACTCCATAACGGAACTCCATGGGTGATTACTGTGGCGGCCGGAACAATAGATCGAGAATTCCACGGCATTCTCAAGCTTGGAAATGGAGTCCCAATCACCGGCTTGTCTCTCTATGCTGGAAACTTCTCTTCCCACCCTATCCCAATTGTTTTCATGGGCTTGTGTGACAGCGTGAAGAAACTTACCAAAGTGAGGAGCAAGATTGTGGTGTGTGAAGACACCAATCAAACACTTTCCGATCAAGTGTTTAACGTCGATGCCGCGAAGGTTGTTGGGGCAGTTTTCATAACAAACAGCTCTGACAGTATGTTCTACTTACAGAACAGGTTTGCTTCTATTATTCTTAACCCAATAAATGGAGAGATTGTGAAAGCTTACATCAAGAAGGGTAGTAGTAATTCTAATTCAAATTCAAAATCAAAAGCAAGCATGTCTTTTAAGATGACAATTTTGGGAACTAGACCAGCTCCTAGTGTGGATAGTTACAGCTCTAGAGGACCATCAAGTAGTTGTCCATTTGTGTTGAAGCCTGATATTACAGCTCCTGGTACATTAGTCTTAGCTGCATGGCCTGACAAGATTCCTGTGGTGGAGTTTGGTTCTGATAAACTCTTCAACAATTTCAATTTGATAAGCGGCACATCCATGGCGTGCCCTCACGTTGCCGGTGTGGCAGCTCTTTTAAAAGAAGCACGTCCGGATTGGAGTCCTGCTGCTATTCGGTCGGCCATCATGACAACCTCGGACATCTTCGACAACACCGCGGGACTCATCAAAGACATCGGCCATGGTTACAAACCGGCTTCTCCTCTGGCTTTAGGAGCTGGTCATGTCAACCCCAACCGAGCACTTGACCCGGGACTAGTTTACGATGCCTGTGTTCAAGATTATGTCAATCTTCTATGTGCTTTGAAGTTCAGCCAGAAGAACATCACGGCCATCACGAGATCCTCCCACAATGATTGCTCTAACCCTTCCTTGGATCTCAACTACCCTTCTTTCATTGCTTTCTTTGGTGCCAACGACTCGTCTTCAAGGACATCACGAGAATTTAAAAGAACTGTGACAAATGTTGGTGAAGAAGGATTAGCAATTTATGTGGCTAGTGTTACTCCCATTGAAGGGTATCGTGTCAGCGTTATCCCTAAAAAATTGGTGTTCAAGGAAAAGAACCAGAAGCTAAATTACAAGTTGAAGATTGAAGGTCCAAGAAAGACAAGAGATAAGAAAGTGTCTTTTGGATACCTCACTTGGACGGATGTGAAGCATGTGGTCAGGAGCCCCATTGTGGTCACCACCATCAAATTCTAA 2268 0.4524 MATQICLSLYISCIITLLHIIVSTLASSDNYIIHMDLSAMPKPFTNHHSWYLSTLSSALDNTQFNFASSKIIYTYTNVMNGFSASLSLAELEALKTTPGYISSIQDIPVKLDTTHSPQFLGLNPHVGAWPAGEFGRDIIVGMVDSGIWPESESFKDNGMTKIPSRWKGHCENSIHCNKKLIGARFFSRGLLSKNPNITTALNSTRDMDGHGTHTSSTAAGSRVDGASYFGYAAGSATGIASRARVAMYKPFWDEGAYSSDIIAAIDSAISDGVDVLSLSFGFNDIPLYQDPIAIATFAAMEKGVFVSTSAGNDGPFLKTLHNGTPWVITVAAGTIDREFHGILKLGNGVPITGLSLYAGNFSSHPIPIVFMGLCDSVKKLTKVRSKIVVCEDTNQTLSDQVFNVDAAKVVGAVFITNSSDSMFYLQNRFASIILNPINGEIVKAYIKKGSSNSNSNSKSKASMSFKMTILGTRPAPSVDSYSSRGPSSSCPFVLKPDITAPGTLVLAAWPDKIPVVEFGSDKLFNNFNLISGTSMACPHVAGVAALLKEARPDWSPAAIRSAIMTTSDIFDNTAGLIKDIGHGYKPASPLALGAGHVNPNRALDPGLVYDACVQDYVNLLCALKFSQKNITAITRSSHNDCSNPSLDLNYPSFIAFFGANDSSSRTSREFKRTVTNVGEEGLAIYVASVTPIEGYRVSVIPKKLVFKEKNQKLNYKLKIEGPRKTRDKKVSFGYLTWTDVKHVVRSPIVVTTIKF* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1703 755 Pfam Fibronectin type-III domain 647 750 IPR041469 -
Lja3g1703 755 SUPERFAMILY Subtilisin-like 111 607 IPR036852 GO:0004252|GO:0006508
Lja3g1703 755 CDD PA_subtilisin_like 343 446 - -
Lja3g1703 755 Pfam Subtilase family 135 568 IPR000209 GO:0006508|GO:0008236
Lja3g1703 755 Gene3D - 620 753 - -
Lja3g1703 755 ProSiteProfiles Serine proteases, subtilase domain profile. 108 603 - -
Lja3g1703 755 Pfam Peptidase inhibitor I9 31 111 IPR010259 -
Lja3g1703 755 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 112 IPR037045 -
Lja3g1703 755 Gene3D Peptidase S8/S53 domain 137 616 IPR036852 GO:0004252|GO:0006508
Lja3g1703 755 PANTHER PUTATIVE-RELATED 19 753 - -
Lja3g1703 755 Gene3D - 336 470 - -
Lja3g1703 755 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 19 753 IPR045051 -
Lja3g1703 755 ProSitePatterns Serine proteases, subtilase family, serine active site. 532 542 IPR023828 -
Lja3g1703 755 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Lja3g1703 755 PRINTS Subtilisin serine protease family (S8) signature 206 219 IPR015500 -
Lja3g1703 755 PRINTS Subtilisin serine protease family (S8) signature 531 547 IPR015500 -
Lja3g1703 755 CDD Peptidases_S8_3 109 568 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1703 Lja-Chr3 18876606 18879259 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1703 7 739 Subtilisin-like Serine Gene Family AT5G67090 45.684 0.0 630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1703 - - gmx:100781249 1063.91