Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1702 ATGGCTTCCACCATTTGTTATTGTCTATGGTTCTCCTATGTCACAATTCTTCACCTGGTTTCCTCACTGGCTAAGTCTGATAATTATATCATCCACATGGACTCATCAGCCATGCCTAAACCATTCACCAACCATCATAGTTGGTACTTGTCCACTCTTTCCTCTGCTTTGGACAATACAGATCTTGATACCAATAATTTGAACTCTGCCTCTTCTAGGCTAATTTACACCTACACCAATGTCATGAATGGTTTCAGTGCAAGTTTATCACTTGCAGAGCTTGAAGCTCTCAAATCCTCTGCAGGATACATTTCATCCATGCCCGATTTACCTATTAAGCTTGACACAACACACTCACCCCGATTCCTTGGCCTCAATCATCGAACCGGTGCATGGCCTGCCGCTAAGTTTGGCCAAGATGTTATCATTGGTGTGGTGGACACTGGACTTTGGCCAGAAAGTAAAAGCTTTAAAGATGATGGGATGACAGAAATTCCTTCACGATGGAAAGGCCAATGTGTAAACAGCATCGGATTCAACTCATCGTTATGCAACAAGAAACTCATTGGAGCTCGGTTCTTTAACAAAGGGTATCGTGCTGAAAACCCCAACATCACCATTGTAAACTCAGCCCGAGATGATACAGATGGTCACGGAACTCACACTTCAAGCACCGCTGCTGGGAGCCGAGTTGACGGTGTATCTTTCTTTGGCTATGCCCCCGGATCAGCAACAGGAGTAGCTCCACGAGCCAGGGTAGCCATGTATAAGGCCGTGTGGTATGACCACGCTGTGGCATCAGATGTAATAGCTGCAATTGACAGCGCAATATCAGATGGTGTAGATGTTCTTTCATTATCACTTGGCTATGACAATGTACCTCTATACGAAGACCCTGTTGCATTAGCCACATTTGCTGCCATGGAGAAAGGCATTTTTGTGTCTACATCAGCAGGGAACGATGGGCCTGACAAACCCCTGCATAACGGAACCCCATGGGTGACAACTGTGGCTGCTGGCACATTGGATCGAGAATTACGCGGCACTCTTAAACTTGGCAATGGAGTCTCAATCACTGGTTTGTCTGTTTATCTGGGAAACTTCTCTTCTTCCCATTTTCCAATTACTTTTATGGGTCTGTGTAACAATGACACTGAACTGACCACGAAAGCGAAGGGCAAGATTGTGGTATGTGAAAATTTTATTTATTCATCAATTTTAATTCAAGAGGCAGAAGCTGTTGGGGCAGTTTTCATATCAAACGACTCTGATAGTTCATTTGGGCATATGTTTCCTTCCATCATCATTGATTCAATGAATGGGGATATTGTCAAAGCTTACATAAAAAAGAACTCTGATTCAACAGCAAGCATGTCTTTTAAGACAACAGCTTTAGGCACTAAACCTGCACCGAGTGTAGACAGTTACAGTTCCAGAGGGCCATCTAAGACCTGTCCATTTGTGTTGAAACCTGACATCACTGCTCCTGGAACATTAATCTTAGCTGCTTGGCCTGAAAAGCTTCAAGTGGATGTGGATAACTATGGCAACGTTACTCTCTTCAACAGCTTCAATATCGTAAGTGGCACATCCATGGCATGCCCTCACATTGCCGGTGTGGGAGCTCTTTTAAAAGGAGCACGTCCTGATTGGAGCCCGGCTGCTATTCGGTCAGCCATCATGACAACCTCGGACATATTCGACAACACCGGGAGATTTATCAAAGACGTTGGCGAAGGTTACAAAAGGGCTACTCCTCTGGCCTTGGGAGCGGGCCATGTCAACCCCAACAGAGCCCTTTTTCCGGGACTTGTTTATGATGCTGGTGTGCAAGATTATGTGAATCTTCTCTGTGCATTGAACTTCACCCAAAAGAACATCACGGCCATCACGAGATCCTCCTCCTTTAATTGTTCCAGCCCTTCCTTGGATCTTAACTACCCTTCTTTCATTGCTTATTTCCATGCCAATGATTCTTCTTCTAGGAGGGTGCAAGAATTTCAGAGAACAGTGACCAATGTTGGGGTGGGACAGACAACTTATGTTGCTAGAGTGACTCCCATCAAAGGATTCCGTGTTAGTGTCATCCCCAACAAGTTGGTGTTCAAAGAGAAGAACGAGAAGCTAAGCTACAAGTTGAGGATCGAGGACGCAAGAATGACAAGGGAGAATGAAGTAGCTTTTGGGTATCTCACTTGGAGGGACATGAAGCATGTGGTTAGGAGCCCTATTGTGGCAACCACCCTCAAATTAGAATCCTAG 2262 0.45 MASTICYCLWFSYVTILHLVSSLAKSDNYIIHMDSSAMPKPFTNHHSWYLSTLSSALDNTDLDTNNLNSASSRLIYTYTNVMNGFSASLSLAELEALKSSAGYISSMPDLPIKLDTTHSPRFLGLNHRTGAWPAAKFGQDVIIGVVDTGLWPESKSFKDDGMTEIPSRWKGQCVNSIGFNSSLCNKKLIGARFFNKGYRAENPNITIVNSARDDTDGHGTHTSSTAAGSRVDGVSFFGYAPGSATGVAPRARVAMYKAVWYDHAVASDVIAAIDSAISDGVDVLSLSLGYDNVPLYEDPVALATFAAMEKGIFVSTSAGNDGPDKPLHNGTPWVTTVAAGTLDRELRGTLKLGNGVSITGLSVYLGNFSSSHFPITFMGLCNNDTELTTKAKGKIVVCENFIYSSILIQEAEAVGAVFISNDSDSSFGHMFPSIIIDSMNGDIVKAYIKKNSDSTASMSFKTTALGTKPAPSVDSYSSRGPSKTCPFVLKPDITAPGTLILAAWPEKLQVDVDNYGNVTLFNSFNIVSGTSMACPHIAGVGALLKGARPDWSPAAIRSAIMTTSDIFDNTGRFIKDVGEGYKRATPLALGAGHVNPNRALFPGLVYDAGVQDYVNLLCALNFTQKNITAITRSSSFNCSSPSLDLNYPSFIAYFHANDSSSRRVQEFQRTVTNVGVGQTTYVARVTPIKGFRVSVIPNKLVFKEKNEKLSYKLRIEDARMTRENEVAFGYLTWRDMKHVVRSPIVATTLKLES* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1702 753 CDD Peptidases_S8_3 113 565 IPR034197 -
Lja3g1702 753 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 18 749 IPR045051 -
Lja3g1702 753 CDD PA_subtilisin_like 349 457 - -
Lja3g1702 753 ProSitePatterns Serine proteases, subtilase family, serine active site. 529 539 IPR023828 -
Lja3g1702 753 ProSiteProfiles Serine proteases, subtilase domain profile. 111 600 - -
Lja3g1702 753 PANTHER PUTATIVE-RELATED 18 749 - -
Lja3g1702 753 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 114 IPR037045 -
Lja3g1702 753 Pfam Fibronectin type-III domain 644 745 IPR041469 -
Lja3g1702 753 Pfam Peptidase inhibitor I9 29 114 IPR010259 -
Lja3g1702 753 Gene3D Peptidase S8/S53 domain 140 613 IPR036852 GO:0004252|GO:0006508
Lja3g1702 753 Pfam Subtilase family 138 564 IPR000209 GO:0006508|GO:0008236
Lja3g1702 753 SUPERFAMILY Subtilisin-like 114 602 IPR036852 GO:0004252|GO:0006508
Lja3g1702 753 Gene3D - 617 749 - -
Lja3g1702 753 Gene3D - 343 466 - -
Lja3g1702 753 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Lja3g1702 753 PRINTS Subtilisin serine protease family (S8) signature 528 544 IPR015500 -
Lja3g1702 753 PRINTS Subtilisin serine protease family (S8) signature 214 227 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1702 Lja-Chr3 18863441 18865702 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1702 1 753 Subtilisin-like Serine Gene Family AT5G67090 45.583 0.0 628