LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja3g1701	ATGGCTTCCACCATTTGTTATTGTCTATGGTTCTCCTATGTCACAATTCTTCACCTGGTTTCCTCACTGGCTAAGTCTGATAATTATATCATCCACATGGACTTATCAGCCATGCCTAAACCATTCACCAACTATCATAGTTGGTACCTGTCCACTCTTTCCTCCGCTTTGGACAATACAGATCTTGATACTAATAATTTGAACTCTGCCTCTTCTAGGCTAATTTACACATACACCAATGTCATGAATGGTTTCAGTGCAAGTTTATCACTTGCAGAACTTGAAGCTCTCAAATCCTCTGCAGGATACATTTCATCCATGCCCGATTTACCTATTAAGCTCGACACAACACACTCACCCCAATTCCTCGGACTCAATCATCAAACCGGTGCATGGCCTGCCGCTATGTTTGGCCAAGATGTTATCATTGGTTTGGTGGACAGTGGAATTTGGCCCGAAAGTGAAAGCTTTAAAGATGACGGGATGACAGAAATTCCTTCACGATGGAAAGGCCAATGTGTGAACAGCATCGGATTCAACTCATCGCTGTGCAACAAGAAACTCATCGGAGCTCGGTTCTTTAACAAAGGGTATCGTGCCGCAAACCCCAACATCACCATTGTAAACTCAGCCCGAGACACAGATGGTCACGGGACTCACACTTCGAGCACCGCTGCTGGGAGCCGAGTTGACGGTGTGTCTTTCTTTGGCTATGCCGCTGGATCAACAAGAGGAGTAGCTCCACGAGCCAGGGTAGCCATGTACAAGGCCTTGTGGCAAGACTACGGTGCGACATCAGATGTAATAGCTGCAATTGACAGTGCAATCTCAGATGGTGTAGATGTTCTGTCACTATCACTTGGATTTGAATATTTTCATCTATACGAAGACCCTGTTGCAATAGCCACATTTGCAGCCATGGAGAGAGGCATTTTTGTGTCTGCATCTGCAGGGAACGATGGGCCTAATATTAAACCTCTGCATAATGGAACCCCATGGATGATAACTGTGGCTGCTGGCACCTTTGATCGGAAATTTCAAGGTACTCTTACGCTTGGCAATGGAGTCTCAATGACTGGTTTGTCTCTTAATCTGGGAAACTTCTCTTCTTCCCATTTTCCTATTACTTTTATGGGTCCGTGTGACAATGTCAATGAACTGACCAAAGCGCAGGGTATGATTGTGGTATGTGAAAATAAATATACACCAATTCTACTTCAAAAAGCCAAAGTTGCTGGTTCAGTTTTCATAGCAGACTTCACTGATAATTATTTGGGGTTTACTCCATCCATCATCATTGATTCGATGAATGGGGATATTGTCAAAGCTTACATCAAGAGTAGCTCTAATTCAACAGCAAGCATGTCTTTTAAGAAAACAGTTTTAGGTACTAAACCTGCACCGAGTGTAGATAGTTATAGTTCCAGAGGGCCATCTAAGACCTGTCCATTTGTGTTGAAACCTGACATCACAGCTCCTGGAACATTAATCTTAGCTGCATGGCCTGAAAAGGTTCCTGTGGATGTGGATCAGTTTAGCAACATTAGTCTCTTCAACAGCTTCAATTTGATTAGTGGCACATCCATGGCATGTCCTCACATTGCCGGTGTGGCAGCTCTTTTGAAAGGAGCACGTCCAGATTGGAGCCCTGCTGCTATTCGGTCAGCCATCATGACAACATCAGACATATTCGACAACACCGCGGAATTCATCAAAGACCTCGGCGAAGGTTACGAAAGGGCTTCTCCTCTGGCCTTGGGAGCGGGCCATGTCAACCCCAACAGAGCCCTTCACCCAGGACTTGTTTATGACGCGGGTGTGCAAGATTATGTGAATCTTCTCTGTGCACTAAACTACACCCAAAAGAACATCATGGCCATCACGAGATCCTCCTCCTATAATTGCTCCAGCCCTTCCTTGGATCTTAACTGCCCTTCTTTCATTGCTTATTTTCATGCCAATGATTTTTCTTCTAGGAGGATGCAAGAATTTCAGAGAACAGTGACCAATGTTGGGGTGGGAAAGTCAACTTATGTTGCTAGAGTCACTCCCATCAAAGGATTTCGTGTTAGTGTCATCCCCAACAAGTTGGTGTTCAAAGAGAAGAACGAGATGCTAAACTACACGTTGAGGATCGAGGACGAAAGCATAATAAGAGAGAATGAAGTAGCTTTTGGGTATCTAACTTGGAGGGACATGAAGCATGTGGTCAGGAGCCCTATTGTGGCACTCAAATCCAAGATCAGATATTATGACGGAGAAGTGTTTTCCTATCCATATGCATAG	2286	0.4444	MASTICYCLWFSYVTILHLVSSLAKSDNYIIHMDLSAMPKPFTNYHSWYLSTLSSALDNTDLDTNNLNSASSRLIYTYTNVMNGFSASLSLAELEALKSSAGYISSMPDLPIKLDTTHSPQFLGLNHQTGAWPAAMFGQDVIIGLVDSGIWPESESFKDDGMTEIPSRWKGQCVNSIGFNSSLCNKKLIGARFFNKGYRAANPNITIVNSARDTDGHGTHTSSTAAGSRVDGVSFFGYAAGSTRGVAPRARVAMYKALWQDYGATSDVIAAIDSAISDGVDVLSLSLGFEYFHLYEDPVAIATFAAMERGIFVSASAGNDGPNIKPLHNGTPWMITVAAGTFDRKFQGTLTLGNGVSMTGLSLNLGNFSSSHFPITFMGPCDNVNELTKAQGMIVVCENKYTPILLQKAKVAGSVFIADFTDNYLGFTPSIIIDSMNGDIVKAYIKSSSNSTASMSFKKTVLGTKPAPSVDSYSSRGPSKTCPFVLKPDITAPGTLILAAWPEKVPVDVDQFSNISLFNSFNLISGTSMACPHIAGVAALLKGARPDWSPAAIRSAIMTTSDIFDNTAEFIKDLGEGYERASPLALGAGHVNPNRALHPGLVYDAGVQDYVNLLCALNYTQKNIMAITRSSSYNCSSPSLDLNCPSFIAYFHANDFSSRRMQEFQRTVTNVGVGKSTYVARVTPIKGFRVSVIPNKLVFKEKNEMLNYTLRIEDESIIRENEVAFGYLTWRDMKHVVRSPIVALKSKIRYYDGEVFSYPYA*	762

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja3g1701	761	SUPERFAMILY	Subtilisin-like	114	601	IPR036852	GO:0004252\|GO:0006508
	Lja3g1701	761	Pfam	Peptidase inhibitor I9	29	114	IPR010259	-
	Lja3g1701	761	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	17	114	IPR037045	-
	Lja3g1701	761	ProSiteProfiles	Serine proteases, subtilase domain profile.	111	597	-	-
	Lja3g1701	761	Gene3D	Peptidase S8/S53 domain	140	610	IPR036852	GO:0004252\|GO:0006508
	Lja3g1701	761	ProSitePatterns	Serine proteases, subtilase family, serine active site.	526	536	IPR023828	-
	Lja3g1701	761	PANTHER	SUBTILISIN-LIKE PROTEASE SBT1.9	20	745	-	-
	Lja3g1701	761	Gene3D	-	343	462	-	-
	Lja3g1701	761	PRINTS	Subtilisin serine protease family (S8) signature	525	541	IPR015500	-
	Lja3g1701	761	PRINTS	Subtilisin serine protease family (S8) signature	138	157	IPR015500	-
	Lja3g1701	761	PRINTS	Subtilisin serine protease family (S8) signature	213	226	IPR015500	-
	Lja3g1701	761	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	20	745	IPR045051	-
	Lja3g1701	761	Pfam	Subtilase family	138	566	IPR000209	GO:0006508\|GO:0008236
	Lja3g1701	761	Pfam	Fibronectin type-III domain	641	742	IPR041469	-
	Lja3g1701	761	Gene3D	-	614	745	-	-
	Lja3g1701	761	CDD	Peptidases_S8_3	113	562	IPR034197	-
	Lja3g1701	761	CDD	PA_subtilisin_like	349	449	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lja3g1701	Lja-Chr3	18850095	18852380	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lja3g1701	1	732	Subtilisin-like Serine Gene Family	AT5G67090	46.245	0.0	627

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja3g1701	-		-	gmx:100786751	961.059