Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1699 ATGTCACTGGGAGAGGTTGCTTGCAGCTACTCACTCATGATCCTTAATGATGAATTGATGATAACATCGCCATCACTTGAGAAGATTTCAACTTTGTTGAAAGCTGCAAATGTACAAGTTGAAGCTTATTGGCCAAGCTTATTTGCTAAACTTGCTGAGAAGAAAAGCATTGAGGATTTGATGTCGAGCGCCGTCGGAGGTGGTGCTTCTGTTGCTGTTTCAGCCCCTGCTGCTGCTGCTTCTGGTGGCGGAGCTGCCGCTGCAGTCGCTCCTTCTACTGAGGAGAAGAAGGAAGAACCCAAGGAAGAGAGTGATGATGATATGGGATTCAGCTTGTTTGACTAG 345 0.4667 MSLGEVACSYSLMILNDELMITSPSLEKISTLLKAANVQVEAYWPSLFAKLAEKKSIEDLMSSAVGGGASVAVSAPAAAASGGGAAAAVAPSTEEKKEEPKEESDDDMGFSLFD* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1699 114 Gene3D - 1 66 IPR038716 -
Lja3g1699 114 Pfam 60s Acidic ribosomal protein 24 113 - -
Lja3g1699 114 MobiDBLite consensus disorder prediction 92 108 - -
Lja3g1699 114 CDD Ribosomal_P1 5 113 - -
Lja3g1699 114 Hamap 50S ribosomal protein L12 [rpl12]. 6 114 IPR027534 GO:0003735|GO:0005840|GO:0006414
Lja3g1699 114 MobiDBLite consensus disorder prediction 84 114 - -
Lja3g1699 114 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1-1-RELATED 1 114 - -
Lja3g1699 114 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 1 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1699 Lja-Chr3 18841115 18841721 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1699 2 114 Cytoplasmic Ribosomal Protein Gene Family AT4G00810 54.386 4.19e-28 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1699 K02942 - zju:107423779 115.546