Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1691 ATGGAAGCACAAAGTTCTCAGCATGGGCAAGTTATCGAAATTGGTGGAGATCTTTGTGAAGAAAGGAAGATTTGTGGGGAAGCGCCATGTGGCTTCGCAGATGCTGGTGCCATCTCCAAGGATTCTGAAGAACGGTCAACTGCCATGCGAAAGCTTTTGATGGCAGTAATCCTTTGTGTTATTTTCATGACCGTTGAAGTAGTTGGTGGCATCAAAGCTAACAGTCTTGCAATATTGACTGATGCTGCACATTTGCTTTCAGATGTTGCAGCATTTGCCATCTCCTTATTTTCTTTATGGGCTGCAGGATGGGAAGCTAATCCCCGTCAGTCATATGGATTTTTCAGAATAGAGATTCTTGGTGCTCTGGTTTCTATCCAATTAATATGGCTGCTTGCTGGGATTCTGGTATATGAAGCCATTGACAGAATGATTGCAGGTCCTAAAGACGTTGATGGTTTTTTGATGTTCATGGTTGCTGCATTTGGTCTTGTGGTTAACATCCTTATGGCTTTTTTATTGGGTCATGATCATGGACATGGTCATGGACATGGACATGATCATGGACATGATCATCATGGCCACAGCCACGGACATGATCATCATCATAGCCACAGCCATGGGGTTTCAGTGACTAGCCATACAAAAGATGAGCACCATCACACCCATGATGAAAAGGATCCAGAGGATGCACACCATCATACCCATGAGGATCACAAGCACCATGATGCCCACAAAGAGGTTACTGAACCACTTCTTGGTGAATCAAAAGACAGGCCCAAGAAGAAGAGGAACATTAATGTGCAGGGGGCTTATCTCCATGTACTTGGAGACTCTATCCAGAGTATTGGGGTAATGATTGGAGGAGCAGTCATATGGTATAAGCCTGAGTGGCAAATAGTTGATCTAATCTGCACTCTGATTTTTTCAGTAATTGTTTTGGGGACTACTATCAACATGCTTCGAAACATTCTGGAAGTCCTGATGGAAAGCACGCCCCGTGAGATAGATGCCACTGAGCTTGAAAGAGGGGTGTTGGAGATGGAAGAAGTATTGGCTGTTCATGAGCTGCACATATGGGCCATTACAGTGGGGAAGGTTCTGCTCGCCTGTCATGTTAAAATCAAACGTGATGCTGATGCAGATATGGTGCTGGACAAGGTTGTTGACTACATCAAAAGGGTTTATAACATCAGCCATGTAACCATCCAGATAGAGCGCTAA 1224 0.4428 MEAQSSQHGQVIEIGGDLCEERKICGEAPCGFADAGAISKDSEERSTAMRKLLMAVILCVIFMTVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEANPRQSYGFFRIEILGALVSIQLIWLLAGILVYEAIDRMIAGPKDVDGFLMFMVAAFGLVVNILMAFLLGHDHGHGHGHGHDHGHDHHGHSHGHDHHHSHSHGVSVTSHTKDEHHHTHDEKDPEDAHHHTHEDHKHHDAHKEVTEPLLGESKDRPKKKRNINVQGAYLHVLGDSIQSIGVMIGGAVIWYKPEWQIVDLICTLIFSVIVLGTTINMLRNILEVLMESTPREIDATELERGVLEMEEVLAVHELHIWAITVGKVLLACHVKIKRDADADMVLDKVVDYIKRVYNISHVTIQIER* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1691 407 MobiDBLite consensus disorder prediction 205 263 - -
Lja3g1691 407 SUPERFAMILY Cation efflux protein transmembrane domain-like 46 330 IPR027469 -
Lja3g1691 407 PANTHER METAL TOLERANCE PROTEIN A1 1 407 - -
Lja3g1691 407 MobiDBLite consensus disorder prediction 180 263 - -
Lja3g1691 407 Gene3D Cation efflux protein transmembrane domain 48 328 IPR027469 -
Lja3g1691 407 Pfam Cation efflux family 52 329 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Lja3g1691 407 MobiDBLite consensus disorder prediction 185 204 - -
Lja3g1691 407 TIGRFAM CDF: cation diffusion facilitator family transporter 49 407 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Lja3g1691 407 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 1 407 - -
Lja3g1691 407 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 335 406 IPR036837 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1691 Lja-Chr3 18756292 18759594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1691 22 407 Inorganic Solute Cotransporters AT3G58810 65.722 1.89e-167 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1691 K14689 - gmx:100790458 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1691 3 18756292 18759594 Lja3g1691 3 18756292 18759594 ECH