Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1684 ATGGATTTGGGGGGACACATCATGACCCGTTTGGTCGGAGACTACATACTGGGTCCTCGAATCGGGTCGGGTTCCTTCGCCGTCGTGTGGCGTTCACGGCATCGCCACTCTGGGTTGGAGGTTGCGGTCAAGGAGATTGATAAGACAAGGTTGAGTCCCAAAGTGGGTGAGAGTCTCATCAAGGAGATCTCTATTCTCAGTACCATCAATCATCCTAACATCGTTAGACTCTTCGAAGCGATTCAGACCAGTGACAGGATTTACCTTGTTTTGGAGTATTGTGGTGGTGGGGACCTTGCTGCTTACATCAATCGCCGTGGGAGAGTTTCCGAATCCGTTGCTCGCCATTTCATGAGGCAATTGGCTGCTGGGTTGCAGGTGCTTCAAGAAAAGAACCTCATACATAGAGATTTAAAACCACAGAACTTACTGTTGGCCACTACTGCAGCTACACCAATTATGAAAATAGGGGATTTTGGTTTTGCAAGGTCTCTCGCACACCAGCAGTTGGCAGATACACTATGCGGTTCACCGTACTACATGGCCCCAGAGATAATTGACAGTCAAAAGTACGATGCCAAGGCTGATTTGTGGAGTGTTGGGGCAATATTGTATCAGCTAGTGATTGGGAGGCCGCCATTCGATGGAAATAGTCAATTGCAGCTTTTTCAAAACATTTTGGCATCTACTGAATTACGCTTTCCACCAGAGGCTTTGGAAGAGCTACATTCTGATTGCTTGAATCTTTGCAGAAGCCTTTTACGTAGAAATCCAGAGGAGAGATTGACATTCAAGGATTTCTTCAATCACAATTTCCTACGGGAACCGAGGTCAGTGGTGAATATTGAACAGTCTCAGTTACATCAGCCAGAAAGTTCAATGGTTCATCAAGTAGATGGCTCTGCCTCTGAGAAGATGTCTCAACTACAACTTGGTGCTGGCACTCATCTGTCAAACCAAGCTCAAGTTTCCCGTTTATTGGAGTCCATTGAGAAAGATTATGTCTTCATCAATTCTCATTTTGCATCATTGGAGGATTTCTCTGACTACTTTGAGGCATTAGCCCAAGATAATTCCTCAAGCAGAGTTTCTATCGGTCCTTCAAAGAGGACTAACCTGGAAATAAGCGTCGCAAAACAAACAAAGGATCTTCCTTCTTCCTCCACTGGTGGGTTAGGAAACTTTAAAAGCAATGAATTTGCTGCCTTGACAAAAGATCAGGGAATTTCCTCACTGCACCCTTCAAATAGGTTAGAGTTGTTGCATCAGTATTTGCAGGTCCTTGGAGAACTTTCACAGGAAAAGTATAATACGGAGCTGTATCTTGAGTCGCTTGCACTTGAGTTGGTGGTTTTGGCTATATGGAAGAAAGCTATAGAGATTTGTAACTCTTGGAAAGCCTCCAGTTCTGAGAGCAGTTCTGCTAATCAATCCGAAATTACATGTGGAGGCTTGGGCTTATCACAAACTACGGAGCTGAAAATAAATTTTTGTGATCCTCCATCTGTTTCCTTGTGGGCTAAACATGGGTTTATTGGTGCAGTTGATCGTGCTGAGAAACTGTCATGTCATATTCAAAACATGGATGGGGCTGCTGAGATGCCAGATGCAATGGAGATTATATTTCAACAAGCACTCTTAGTTGGGACAAGTGGTGCTGTAGATGAGTATATGAAGAACAGAGATAGGGCTACTGCAGCTTACTCAAAAGCAATGCTTCTACTTTTGTTCATTGTGGGAGAAGCAGAGAACCTTCCACTGAACCCACCATTTTCACTTCTTGCTGCTGATAAGAAGCGAATCTTACAATATATTCGCAATTTGCAGTTTCATCTGAAATCCTCATCTGAGTCCTCTTCAAAGGAAGCCGATGCTCTTGCGGCAAAGTAA 1890 0.4402 MDLGGHIMTRLVGDYILGPRIGSGSFAVVWRSRHRHSGLEVAVKEIDKTRLSPKVGESLIKEISILSTINHPNIVRLFEAIQTSDRIYLVLEYCGGGDLAAYINRRGRVSESVARHFMRQLAAGLQVLQEKNLIHRDLKPQNLLLATTAATPIMKIGDFGFARSLAHQQLADTLCGSPYYMAPEIIDSQKYDAKADLWSVGAILYQLVIGRPPFDGNSQLQLFQNILASTELRFPPEALEELHSDCLNLCRSLLRRNPEERLTFKDFFNHNFLREPRSVVNIEQSQLHQPESSMVHQVDGSASEKMSQLQLGAGTHLSNQAQVSRLLESIEKDYVFINSHFASLEDFSDYFEALAQDNSSSRVSIGPSKRTNLEISVAKQTKDLPSSSTGGLGNFKSNEFAALTKDQGISSLHPSNRLELLHQYLQVLGELSQEKYNTELYLESLALELVVLAIWKKAIEICNSWKASSSESSSANQSEITCGGLGLSQTTELKINFCDPPSVSLWAKHGFIGAVDRAEKLSCHIQNMDGAAEMPDAMEIIFQQALLVGTSGAVDEYMKNRDRATAAYSKAMLLLLFIVGEAENLPLNPPFSLLAADKKRILQYIRNLQFHLKSSSESSSKEADALAAK* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1684 629 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Lja3g1684 629 Gene3D Transferase(Phosphotransferase) domain 1 6 350 - -
Lja3g1684 629 PANTHER BNAC06G18300D PROTEIN 9 605 - -
Lja3g1684 629 Pfam Protein kinase domain 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g1684 629 ProSiteProfiles Protein kinase domain profile. 15 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g1684 629 CDD STKc_ATG1_ULK_like 21 272 - -
Lja3g1684 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Lja3g1684 629 SUPERFAMILY Protein kinase-like (PK-like) 11 312 IPR011009 -
Lja3g1684 629 SMART serkin_6 15 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g1684 629 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 9 605 IPR045269 GO:0004674|GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1684 Lja-Chr3 18657559 18663085 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1684 11 291 CBL-interacting serine-threonine protein kinases AT2G30360 35.640 1.00e-49 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Lja3g1684 Pkinase 1.9e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1684 - K08269 gmx:100779262 881.708
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1684 3 18657559 18663085 Lja3g1684 3 18657559 18663085 ECH