Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1683 ATGTTGAGTTCTTTTGTTATTGTTAGTTTTGGATTTCTTGTGTTCTTGCCATTTACTTGTTCCCTCCAAGTGCAAGCAAAACTAATTGAACCCCCTTTGCATCCAAATTCTTGCAATGAAACATGTGGGAAGTTTCATGTTCCTTTTCCATTCTATGTCAATACTTCTTGTGTGTCAGTTTCCCCTGCTTTCCACCTCTCTTGCTCAAATTCAGCTTCCCTTCTGCTTAAAATCGGCTCAGAAAACTATCCGGTTTTGGAGTTCTTCTCAGATGGGTTGTTAGTAGGCTTTCCAGGCACATCGCCTTGCCGCCAGTACAATGACTTGAATTCATTTGGTGAAGGTTTTGGAGGAAAGGACTACTTTGGAGTCTCAGTTGATAATGTCATTGGTCTCTATGACTGTGAGGATTCTTCGCTATGCAAAGCGAATTGTGAAACGATTAACCTTCCTGGTTGTGATGGAAGTGGCAGTGGTTCCCTTGGCTGCTGTTATCCACTCTCTGACCACAGCGTATGGCATCTTGGTGAAGGCTTTTCAGTGTTTTCTCAGTTTGGATGCAGGGGATTTTCTAGTTGGGCTGTTTTGAGAGGGGCATATGCAGGAAAACGTGGGGTCAAATTGGAATGGGGTGTTCCTAGAAACTCCTCCAAGGATGTTTGTGCAAGGAATGCAGAGATTGTTAATGCTACAGCAATTGCAGGAGGTGTAAGGTGTGTTTGTCAAGATGGATTTGTTGGTGACGGGTTTGCTAATGGAACAGGATGCTTGCCGGCCTGTATCAAGGATGGACATGAAGCATATGGAAGTGATTGCCACATAAAAAGACATGATCAAAGAAAAATGGTTATCATTGCTGGAATCCTCGGTCCAGTTATTATTGTTGCCTCCTTGATTGTACTATTTTATCTTCTTAAAAGAAAAGAAAAGCCAGGAATGTTTGATGCTGAGCAGGCTTATTATCATAACATTTCATTTCGCAAAGGTTGTAGAACTCGACTATTCAGCCACCGAGAGCTAGAGGAAGCCACCAATGGTTTTGAAGAGGGGAAGAAGCTCATGCACGGAAATAACGGGACAATGTTTGCTGGAGTTCTCGGAGATGGATCTCACGTAGCTGTCCACAGGTTAAAATGTGGGAATGAGAAGGACATCGTGCAAGTCCTGTCACAAATTGAGGTTCTATCTGCTATTGTACACAGGAATGTGGCGTGCCTTCTTGGATGCTGTGTTGACCCTGGTTACAATCCCCTAGTGGTTTATGAATACCCTGCAAATGGTACCTTGGAGGAGCATTTAAGCAAGAGTAAAGGGCAAAAACTTGGTTTAGATTGGTATAGGAGATTGACTATTGCTGCAGAAACAGCCAGCGCTGTTGCATTATTACATTATGAGAAGTCTCCTCCTATATTTCACCATAACCTCAAGTCTAGCTGCATCTTCCTAGATGATGATTTTTCTGTCAAGATTGCAGGATTTGGGCTACTTAGCTCTGATGTTAGCTATGAATCTCAGTTTGTAAAGAACCGCGAGTGCTTTCGCTTCTGCAAAAATGATGTCTATGACATGGGTGTGGTGATTCTTGAGATCATCTCAGGCTCAAATCACTTGGACTCTCCTACTTCAGCCTTGCAGAAAATAAGAGATGGGAAGCTAGAAGAAATTGTTGATCCACTTCTTTACTATCATGAGCAACCGCATAATCGGCAAGAGCAGATACAGGTAATTGCAGACCTTGCAACAAGATGCCTGCTATTTGGTGCAGATGGAAAGCTGGGAATGATCGATGTTGCTAGGGAGTTGGTACACTTAACTAAAGAGATTCCTGATGGAGGGAGCATGAGAGGGCCTTCACTGGAGGAGACATTCTCAAATTCAAGCCTTCTTCAAATGATATCAATGTCTCCTGATTCTATGAATATTCCTTGA 1929 0.4282 MLSSFVIVSFGFLVFLPFTCSLQVQAKLIEPPLHPNSCNETCGKFHVPFPFYVNTSCVSVSPAFHLSCSNSASLLLKIGSENYPVLEFFSDGLLVGFPGTSPCRQYNDLNSFGEGFGGKDYFGVSVDNVIGLYDCEDSSLCKANCETINLPGCDGSGSGSLGCCYPLSDHSVWHLGEGFSVFSQFGCRGFSSWAVLRGAYAGKRGVKLEWGVPRNSSKDVCARNAEIVNATAIAGGVRCVCQDGFVGDGFANGTGCLPACIKDGHEAYGSDCHIKRHDQRKMVIIAGILGPVIIVASLIVLFYLLKRKEKPGMFDAEQAYYHNISFRKGCRTRLFSHRELEEATNGFEEGKKLMHGNNGTMFAGVLGDGSHVAVHRLKCGNEKDIVQVLSQIEVLSAIVHRNVACLLGCCVDPGYNPLVVYEYPANGTLEEHLSKSKGQKLGLDWYRRLTIAAETASAVALLHYEKSPPIFHHNLKSSCIFLDDDFSVKIAGFGLLSSDVSYESQFVKNRECFRFCKNDVYDMGVVILEIISGSNHLDSPTSALQKIRDGKLEEIVDPLLYYHEQPHNRQEQIQVIADLATRCLLFGADGKLGMIDVARELVHLTKEIPDGGSMRGPSLEETFSNSSLLQMISMSPDSMNIP* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1683 642 Pfam Wall-associated receptor kinase galacturonan-binding 38 88 IPR025287 GO:0030247
Lja3g1683 642 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 47 637 IPR045274 GO:0007166
Lja3g1683 642 Gene3D Phosphorylase Kinase; domain 1 319 423 - -
Lja3g1683 642 PANTHER OS10G0351500 PROTEIN 47 637 - -
Lja3g1683 642 ProSiteProfiles Protein kinase domain profile. 347 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g1683 642 Gene3D Transferase(Phosphotransferase) domain 1 425 611 - -
Lja3g1683 642 Pfam Protein tyrosine and serine/threonine kinase 349 532 IPR001245 GO:0004672|GO:0006468
Lja3g1683 642 SUPERFAMILY Protein kinase-like (PK-like) 330 601 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1683 Lja-Chr3 18649197 18652828 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1683 1 615 Receptor kinase-like Gene Family AT2G23450 30.226 6.93e-66 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lja3g1683 PK_Tyr_Ser-Thr 8.5e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1683 - - gmx:100810557 964.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1683 3 18649197 18652828 Lja3g1683 3 18649197 18652828 ECH