Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1681 ATGGCGTTTACAGCTGTTTCAATCGTGGCATTCCCATTTCGCAATATCATCCTTACCAAGACTCAAACCCACACAAAAACCTGCTCCTCCATGGTATCATCGTTCTCTCTGCTTCGTCGTTCCCTTATTGATCTATTCATACTCTTGCATATGGGAGCAACCTTCAAAGCCGGTGATGGACGAGCTGCTTGCAAGGCTACTGAAGAGGAAACCAAGAAGTCAAACTTGACAGTTGCAAATTCGAATGGATTTGGGGAGTGTATGTTTGTTGATGATGAACTCAAGGCAGAAGATCAGCCAGTGCCTATGTCTCTGGAGCAAACAGTGCATAGTGAATCTGATCAAATGTCTGTAGAAGAGCCTATTGTGGACATCGATGCCGGAGATGCGAATAATACCCTTGCAGTTACTGATTATATTGAAGGTCTTTATTCCTACTACAGAAAAATTGAGAGTACTGGCTGTGTCTCACCAAATTATATGACACAACAATGTGATATTAATGAAAGGATGAGGGCAATACTGATTGACTGGCTTATTGAGGGTTTCCATATGAAGATACAGCATTGCCGATTAAGAGGAGCCAAAACTCCAATTTTGTGGTTGCCATCCTTCCCATCAGAGTCAGACTTTGGAGATTGTAGTTTGGAGGTGTTCAGAACTGCTGAGATATTTGTGATCTTTTTCAAGTATCAACAGGTGGATTGTGATGAGTGCAAGAGATTGTGCAGCAAAGGAGTCTCTGGTCAAGGTCAACGGGGGGAGCATCTTGAAAAAAGAAGGGATACATGA 792 0.4268 MAFTAVSIVAFPFRNIILTKTQTHTKTCSSMVSSFSLLRRSLIDLFILLHMGATFKAGDGRAACKATEEETKKSNLTVANSNGFGECMFVDDELKAEDQPVPMSLEQTVHSESDQMSVEEPIVDIDAGDANNTLAVTDYIEGLYSYYRKIESTGCVSPNYMTQQCDINERMRAILIDWLIEGFHMKIQHCRLRGAKTPILWLPSFPSESDFGDCSLEVFRTAEIFVIFFKYQQVDCDECKRLCSKGVSGQGQRGEHLEKRRDT* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1681 263 Gene3D - 156 181 - -
Lja3g1681 263 SUPERFAMILY Cyclin-like 131 182 IPR036915 -
Lja3g1681 263 PANTHER CYCLIN-B2-1 54 182 - -
Lja3g1681 263 PANTHER CYCLINS 54 182 IPR039361 -
Lja3g1681 263 Pfam Cyclin, N-terminal domain 144 181 IPR006671 -
Lja3g1681 263 Gene3D - 144 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1681 Lja-Chr3 18621345 18627111 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1681 68 181 Core Cell Cycle Gene Families AT2G17620 50.000 6.87e-34 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1681 K21777 - gmx:100798068 156.762