Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1649 ATGGAGAATCGCGACGTATCAGCGTACTACCAGAACAGAATGGCGCACTTCGGCGTCGTCAGCGACGAGTGGCTCGCTCAGGCCGAGTCCGCCATCGTCCCCTCCAACACCCCCGCCGCCCCCTCCCACACCGCCGCTGATTCCAATTTCTCCGTGATCGACGAGTTCAACAAGTGGCGGAGAAACCCCGATTTGGCTGAGGCCGTCGCCGCCATTCGCGCCCTCGCCGCTGTCATCAGCTCCAGCAAGGCCTCCACCATAGTGCACCTCGCAAACGAGCTCAAGAACGCCTCCGATTCCCTCAAATCATCGGATACGACCTCGATCTCGTTGACAGCAGCATGTGATTTGTTTATGAGATATGTGACAAGGACTTCTGCTTTGGAATATGAAAACTTCAATTCGGCAAAATCGCGTTTGATTGAGCGCGCTGAAAAGTTTGGGGAAATCTCCCTCAAGGCTCGCAAGATTATTGCAATGCTGGGCCAAGATTTTATATTTGATGGTTGTACGATCTTGGTTCATGGTTTCTCTAGAGTTGTCTTTGAACTTCTCAAACTGGCTGCGCAGAATAAGAAGCTGTTCCGGGTCCTCTGCACTGAGGGGAGACCAGACCGGACAGGTTTAAGGTTGTCCAGTGAGCTGGCCAAGCTTGATGTTCCTGTGAAACTGGTAATAGACTCTGCAGTGGCATATACAATGGATGAGGTGGACATGGTATTATTTGGGGCAGATGGAGTTGTTGAAAGTGGTGGTATAATCAACATGATGGGGACTTACCAGATTGCTTTGGTTGCAAAGTGTTTGGATAAGCCAGTTTATGTGGCTGCTGAGAGTTACAAGTTTGCTCGGCTTTACCCTCTCGATCAAAAGGATTTGGAACCTGCGTTACGCCCAGTTGATTTTGGCGTTCCTATTCCGTCCAAGGTTGAGGTTGAATGCTCTGCCCGGGATTATACTCCTCCTCAATATCTGACTCTGCTTTTCACAGATTTAGGTGTTCTTACTCCATCTGTTGTTAGTGATGAGCTCATCCAGCTATACTTGTAG 1050 0.4981 MENRDVSAYYQNRMAHFGVVSDEWLAQAESAIVPSNTPAAPSHTAADSNFSVIDEFNKWRRNPDLAEAVAAIRALAAVISSSKASTIVHLANELKNASDSLKSSDTTSISLTAACDLFMRYVTRTSALEYENFNSAKSRLIERAEKFGEISLKARKIIAMLGQDFIFDGCTILVHGFSRVVFELLKLAAQNKKLFRVLCTEGRPDRTGLRLSSELAKLDVPVKLVIDSAVAYTMDEVDMVLFGADGVVESGGIINMMGTYQIALVAKCLDKPVYVAAESYKFARLYPLDQKDLEPALRPVDFGVPIPSKVEVECSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1649 349 Gene3D - 153 349 IPR042529 -
Lja3g1649 349 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 7 349 - -
Lja3g1649 349 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 7 349 - -
Lja3g1649 349 SUPERFAMILY NagB/RpiA/CoA transferase-like 65 348 IPR037171 -
Lja3g1649 349 Pfam Initiation factor 2 subunit family 65 337 IPR000649 GO:0044237
Lja3g1649 349 Gene3D - 47 150 IPR042528 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1649 Lja-Chr3 18209289 18211670 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1649 6 349 Eukaryotic Initiation Factors Gene Family AT1G53880 78.779 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1649 K03239 - gmx:102669842 551.977