Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1645 ATGGCTCCATCTCCCTCTCTCCTTCTCCCCCTCACTTTCTCATTCTTCATTGCCACACTCTCACTACCACCTTCATCATCATCTTCTGACCCAGAAAAGCAAACCTTCATCGTCCAAGTCCAACATGAAGCCAAGCCTTCCATTTTCCCAACCCATAAGCACTGGTACGAGTCCTCCCTCTCCTCCATCTCCACCACCACAACTTCCACTAACCAAATCATCTACACCTACGACACTGTTTTCCACGGTTTCTCTGTAAAGCTCTCACCTCTAGAGGCCCAGAAGCTGCAATCACTCTCCCATGTCACCACCCTTATACCAGAACAGGTTCGCCAGCTTCACACCACTCGTTCTCCTCACTTCCTCGGTCTCAAAACCGCCGACAGAGCCGGGTTGCTCCATGAGACTGATTTCGGATCGGATCTTGTCATCGGAGTCATCGACACTGGTATCTGGCCGGAGAGGGAGAGCTTCAACGACCGTGATCTCGGTCCTGTTCCGGCTAAGTGGAAGGGACAGTGTGTTGCTGGAAGAGGCTTTCCGGCGAGCTCCTGCAACAGGAAGCTCATCGGAGCACGGTATTTTTCCGGTGGGTATGAGGCTAACAGTGGGAAGATGAACGAGACGACGGAGTATCGTTCCCCGAGGGACTCCGATGGCCACGGTACGCACACGGCTTCGATAGCTGCCGGCAGGTATGTATCTCCGGCGTCTACCTTGGGCTATGCTAAAGGGGTGGCGGCGGGCATGGCCCCCAAAGCCCGCCTCGCCGTTTACAAGGTGTGTTGGAATGGAGGCTGCTTTGACTCCGATATCCTCGCGGCGTTTGACGCCGCCGTGTCCGACGGCGTCGATGTGGCGTCCCTCAGCGTTGGGGGTGTGGTGGTTCCGTACCACCTCGACTCCATCGCTATTGGAGCTTTCGGGGCCTCCAGTGCCGGGGTTTTTGTCTCTGCCTCCGCCGGTAACGGTGGTCCCGGCGGTCTCACCGTCACCAATGTGGCACCATGGGTGACCACTGTGGGTGCTGGAACCATAGACAGGGATTTCCCTGCTGATGTGAAGCTTGGGAATGGTAAGGTTATACCAGGGGTTAGTGTTTATGGCGGGCCGGGTCTAACTCCGGGTCGGATGTACCCGGTTGTGTACGCGGGTGGTGAACAAGGTGGCAGTGGCGGTGGAGGGGGTGATGGTTATTCGTCTTCACTTTGCTTGGAAGGTTCGTTAGATCATAACTTTGTAAAGGGAAAGATTGTAGTTTGTGACAGGGGCATTAATTCAAGAGCTGCCAAGGGTGAAGTGGTGAAAGAATCAGGAGGAGTTGGCATGATTTTGGCTAATGGGGTGTTTGATGGTGAAGGGTTGGTGGCTGATTGTCATGTGTTGCCGGCCACCGCGGTTGGTGCCAGTAGCGGTGATGAAATCCGTAGGTACATTGCGGCTGGGGCTAAATCCCGGTCGCCGCCCACCGCTACCATTGAGTTTAAAGGAACAAGGCTTGGGGTTAGGCCTGCACCTGTTGTGGCATCTTTCTCAGCTAGAGGACCAAACCCTGAATCCCCTGAGATTTTGAAGCCTGATGTTATAGCACCCGGGTTGAACATTCTAGCTGCTTGGCCTGATAGAGTTGGACCTTCTGGGGTTCCTTCGGATGTGCGCAGAACCGAGTTCAACATACTTTCCGGGACTTCAATGGCGTGTCCTCATGTTTCTGGTTTGGCTGCTTTGTTGAAAGCGGCTCATCCCGACTGGAGTCCTGCTGCTATTAAATCAGCTCTGATGACCACAGCTTATACCGTGGATAACAAGGGCGATGCCATGTTGGATGAGTCCAATGGGAATGTGTCCTTGGTGTTTGATTACGGATCCGGCCATGTTCATCCAGAGAAAGCCATGGACCCGGGTTTGGTTTATGATATTTCTACCTATGATTATGTGGATTTCTTGTGTAATTCGAATTACACCGCCAAGAACATCAAAGTGATCACAAGGAAGATTGCTGATTGCAGTGGGGCTAAAAAGGCAGGACATGCTGGCAATTTGAATTACCCATCGTTGTCTGCAGTTTTTGCACAATATGGGAAGCATAAAATGTCCACACACTTCATTAGAACTGTGACCAATGTTGGGGACCCCAAATCAGTGTACAAGGTCACTATTAAACCACCTCCTGGTATGGTGGTCTCAGTAGAGCCAGAGACCTTATCTTTCAGGAGGGTGGGTCAGAAGTTGAACTTTCTTGTTAGGGTGCAGACTAGGGAAGTGAAGCTTTCTCCTGGGAGTTCTAGTATGAAGAGTGGTTCCATTGTTTGGTCTGATGGCAAGCACACTGTCACAAGTCCCTTAGTTGTGACAATGCAGCAACCTCTGGATTAG 2376 0.5215 MAPSPSLLLPLTFSFFIATLSLPPSSSSSDPEKQTFIVQVQHEAKPSIFPTHKHWYESSLSSISTTTTSTNQIIYTYDTVFHGFSVKLSPLEAQKLQSLSHVTTLIPEQVRQLHTTRSPHFLGLKTADRAGLLHETDFGSDLVIGVIDTGIWPERESFNDRDLGPVPAKWKGQCVAGRGFPASSCNRKLIGARYFSGGYEANSGKMNETTEYRSPRDSDGHGTHTASIAAGRYVSPASTLGYAKGVAAGMAPKARLAVYKVCWNGGCFDSDILAAFDAAVSDGVDVASLSVGGVVVPYHLDSIAIGAFGASSAGVFVSASAGNGGPGGLTVTNVAPWVTTVGAGTIDRDFPADVKLGNGKVIPGVSVYGGPGLTPGRMYPVVYAGGEQGGSGGGGGDGYSSSLCLEGSLDHNFVKGKIVVCDRGINSRAAKGEVVKESGGVGMILANGVFDGEGLVADCHVLPATAVGASSGDEIRRYIAAGAKSRSPPTATIEFKGTRLGVRPAPVVASFSARGPNPESPEILKPDVIAPGLNILAAWPDRVGPSGVPSDVRRTEFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIKSALMTTAYTVDNKGDAMLDESNGNVSLVFDYGSGHVHPEKAMDPGLVYDISTYDYVDFLCNSNYTAKNIKVITRKIADCSGAKKAGHAGNLNYPSLSAVFAQYGKHKMSTHFIRTVTNVGDPKSVYKVTIKPPPGMVVSVEPETLSFRRVGQKLNFLVRVQTREVKLSPGSSSMKSGSIVWSDGKHTVTSPLVVTMQQPLD* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1645 791 Gene3D - 347 501 - -
Lja3g1645 791 MobiDBLite consensus disorder prediction 206 225 - -
Lja3g1645 791 CDD PA_subtilisin_like 353 493 - -
Lja3g1645 791 Pfam Fibronectin type-III domain 680 784 IPR041469 -
Lja3g1645 791 CDD Peptidases_S8_3 112 598 IPR034197 -
Lja3g1645 791 Pfam Subtilase family 139 614 IPR000209 GO:0006508|GO:0008236
Lja3g1645 791 SUPERFAMILY Subtilisin-like 113 636 IPR036852 GO:0004252|GO:0006508
Lja3g1645 791 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 114 IPR037045 -
Lja3g1645 791 Gene3D - 649 787 - -
Lja3g1645 791 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Lja3g1645 791 PRINTS Subtilisin serine protease family (S8) signature 561 577 IPR015500 -
Lja3g1645 791 PRINTS Subtilisin serine protease family (S8) signature 217 230 IPR015500 -
Lja3g1645 791 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED 15 790 - -
Lja3g1645 791 ProSitePatterns Serine proteases, subtilase family, serine active site. 562 572 IPR023828 -
Lja3g1645 791 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.5 15 790 - -
Lja3g1645 791 Gene3D Peptidase S8/S53 domain 141 645 IPR036852 GO:0004252|GO:0006508
Lja3g1645 791 Pfam PA domain 379 475 IPR003137 -
Lja3g1645 791 Pfam Peptidase inhibitor I9 35 114 IPR010259 -
Lja3g1645 791 ProSiteProfiles Serine proteases, subtilase domain profile. 118 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1645 Lja-Chr3 18153369 18156153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1645 35 790 Subtilisin-like Serine Gene Family AT3G14240 77.836 0.0 1203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1645 3 18153369 18156153 Lja3g1645 3 18153369 18156153 ECH