Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1634 ATGGGAGGTAGAGGAAGCAAGTTAATTAGTAATTGGGTTGCTGCAGGTGGCAGTGCTTACAACTACAAGCGCATAGAAGGCCCTCTATCGGCACCAAAAGGTTATGTTCCAATCTGTGTTGGCACAAATGATGACACTTGTAGGCGTTTTATTGTTCACATCAGAGCACTTCGTGGTGCATTTTTCTGTGAGCTTCTAGGTAAGTCTGCAGAAGAATATGGGTACATGAATGAAGGGGTTTTGAGGATCCCATTTGAAGCACAAGCTTTTGAAGAGTGTTTCATTAGAAAGACCAACCGAAAGCCCAAAATTAAGTTCTTGAGGGTAAAACCAACTTGA 339 0.4248 MGGRGSKLISNWVAAGGSAYNYKRIEGPLSAPKGYVPICVGTNDDTCRRFIVHIRALRGAFFCELLGKSAEEYGYMNEGVLRIPFEAQAFEECFIRKTNRKPKIKFLRVKPT* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1634 112 Pfam Auxin responsive protein 30 92 IPR003676 GO:0009733
Lja3g1634 112 PANTHER SMALL AUXIN-UP RNA-RELATED 4 111 - -
Lja3g1634 112 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 4 111 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1634 Lja-Chr3 18016026 18016489 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1634 26 90 Calmodulin-binding Proteins AT3G43120 41.538 2.50e-09 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1634 K14488 - gmx:102666083 141.739