Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1633 ATGGGAGCTAAAGGAAGCAAATTAAGTAAATGGGTTGGTGTTGGGAGTGCTCACAAGCGCATAGAAGGGTCTCTATTATTGGCACCTAAAGGTTATGTTCCAATTTGTGTTGGCACAAATGAGGACACTTGCACGCGATTTATTGTTAATATCAGAGCCCTTCGTCATGCATTTTTCTGTGAGCTGCTAGGAAAGACTGCAGAAGAATATGGGTTCATGAATGAAGGGGTTTTGAGGATCCCGTTTGAAGCACAAGCTTTTGAAGAGTGGTCCATCACCAACTCCAACAAAAAGCTTAAAATTAAGATTAGGAGGGTCACAAATTAG 327 0.4159 MGAKGSKLSKWVGVGSAHKRIEGSLLLAPKGYVPICVGTNEDTCTRFIVNIRALRHAFFCELLGKTAEEYGFMNEGVLRIPFEAQAFEEWSITNSNKKLKIKIRRVTN* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1633 108 PANTHER SMALL AUXIN-UP RNA-RELATED 3 99 - -
Lja3g1633 108 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 99 IPR003676 GO:0009733
Lja3g1633 108 Pfam Auxin responsive protein 28 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1633 Lja-Chr3 18012338 18012664 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1633 29 89 Calmodulin-binding Proteins AT4G34750 40.984 1.08e-09 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1633 K14488 - gmx:102666083 133.265