Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1631 ATGGGAGCTAAAGGAAGCAAGCTAAGTAGTGGTACTGGTGGCAGTGCTCACAAGCGCATAGAAGGGACTCTATTGGCTCCTAAAGGATTTGTTCCAATCTTTGTTGGCACAAATGAGGATACTTGCACACAATTTTTTGTTCACATCAAAGCACTTCGTGATGCATTTTTCTGTGAGCTTCTAGGTAGGACTGCAGAAGAATACGGGTTCATGAACGAAGGGGTTCTCAGGATCCCATTTGAAGCACATGCTTTTGAAGAGTGGTTCATCACAAACTCCAACAAAAAACTTAAAATGAAGATTAGGAGGTTTTGA 315 0.419 MGAKGSKLSSGTGGSAHKRIEGTLLAPKGFVPIFVGTNEDTCTQFFVHIKALRDAFFCELLGRTAEEYGFMNEGVLRIPFEAHAFEEWFITNSNKKLKMKIRRF* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1631 104 Pfam Auxin responsive protein 25 87 IPR003676 GO:0009733
Lja3g1631 104 PANTHER SMALL AUXIN-UP RNA-RELATED 3 98 - -
Lja3g1631 104 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 98 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1631 Lja-Chr3 18002029 18002343 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1631 27 87 Calmodulin-binding Proteins AT4G34750 39.344 9.04e-07 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1631 K14488 - gmx:102666083 124.405