Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1630 ATGGGAGCTAAAGGAAGCAAGCTAAGTAGTGGTGGTGCTCACAAGCGCATAGAAGGATCTCTATTTGCTCCTAAAGGCTATGTTCCAATCTGTGTTGGCACAAATGAGGACACTTGCACACGATTTTTTGTTCACATCAAAGCACTTCGTGATCCATTTTTCTGTGAGCTTCTAGGTAGGACTGCAGAAGAATACGGGTTCATGAATGAAGGAGTTCTCAGAATCCCATTCGAAGCACAAGCATTTGAAGAGTGGTTCATTACAAACTCCAATAGAAAGCTTAAAATTAAGATTAGGAGGATTGTGACAAATTAA 315 0.4063 MGAKGSKLSSGGAHKRIEGSLFAPKGYVPICVGTNEDTCTRFFVHIKALRDPFFCELLGRTAEEYGFMNEGVLRIPFEAQAFEEWFITNSNRKLKIKIRRIVTN* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1630 104 PANTHER SMALL AUXIN-UP RNA-RELATED 3 94 - -
Lja3g1630 104 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 94 IPR003676 GO:0009733
Lja3g1630 104 Pfam Auxin responsive protein 20 84 IPR003676 GO:0009733
Lja3g1630 104 Coils Coil 91 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1630 Lja-Chr3 17996045 17996359 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1630 24 84 Calmodulin-binding Proteins AT4G34750 42.623 4.07e-09 49.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1630 3 17996045 17996359 Lja3g1630 3 17996045 17996359 ECH