Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1629 ATGGGAGCTAAAGGAAGCAAGTTAAGTAAATGGGTTGGTGCTGGCAGTGCTCAGAAGCACATAGAAGGTCCTCTATTGCTGGCTCCTAAAGGTTATGTTCCAATTTGTGTTGGCACAAATGAGGACACTTGCATGAGATTTGTTGTTCACATAAAAGCACTCCGTGATGCATTTTTCTGCGAGCTTCTAGGTAGGACTGCAGAAGAATATGGGTTCATGAATGAAGGAGTTCTCAGGATCCCATTCGAAGTACAAGCTTTTGAAGAGTGGTTTATCACAAACTCCAACAGAAAGCTAAAAATTAAGATTAGGAGGGTTGTGACAAATTAG 330 0.4152 MGAKGSKLSKWVGAGSAQKHIEGPLLLAPKGYVPICVGTNEDTCMRFVVHIKALRDAFFCELLGRTAEEYGFMNEGVLRIPFEVQAFEEWFITNSNRKLKIKIRRVVTN* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1629 109 Pfam Auxin responsive protein 28 89 IPR003676 GO:0009733
Lja3g1629 109 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 99 IPR003676 GO:0009733
Lja3g1629 109 PANTHER SMALL AUXIN-UP RNA-RELATED 3 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1629 Lja-Chr3 17992500 17992829 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1629 8 89 Calmodulin-binding Proteins AT4G34750 35.366 3.21e-09 49.7