Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1611 ATGCATGCATGGAGGGGTTACAAAAAAACTAAGGAAAAAGAAAAACGAAAAAATATTATGGCCGCGGCTCCGCCGTCTCTCTTCTTCATTATCATCACCGCCACCACCACTATCATCATCACATTGCCACTGGTAGTACATTCCATATCAGAAGCTGAAGCGTTGCTGCGTCTCAAAAACTCGTTCTCTAATGCTCAATCTCTTGATACCTGGGTTGCTGGCTCCGTTCCTTGCACTGAAGATGATAATTGGGAAGGTGTTGTTTGCTACAATGGCCTTGTCACCGGGCTTCGCCTTGAACAAATGGGGCTGTTTGGGGAAATTGATGTTGATGCGTTGCTCGAACTCCAGGGTCTTCGAACTTTAAGCTTTATGAGCAATTCATTCTCAGGTTCCATCCCGCAACTCAATCGAATTGGTTTCTTGAAAGCCATTTATTTGTCAGGGAATAAGTTTTCAGGGGAAATTCCTCAGGACTACTTCGCTGGAATGAGGTCTTTGAAGAAAGTATGGCTTTCTGATAACCAATTCGCAGGGAAGATTCCAGTATCTTTGGTAGATATTCCTCAGCTTATGGAGTTGCATCTTGAAAACAACCAGTTTAGTGGAACAATTCCAGACCTGAAGAACCCTTCTCTGGTGAAACTCAATGTTTCCAACAATAAATTGGAGGGTGAAGTTCCAGCTAGTTTGTTGAGATTCGACGATACCTCGTTTCAAGGGAATTCTGGTATTTGTGGTGAGAAATTTGGCTCATGTGAGAAGCCAAAGGAGAACACAACTGCACCGAATAATGCTGAGCCGAACAACAATGGTGGTGGTGGTATTGTTGTGCCTGAGGAAAATAAGAGTTGGGGTGGCTCGATGGAGATTGCTGCGTTTGTGTTGGCGAGTGTAGTGGTTATCTCACTTGTTGTCATTTGCATTGTGAAATCAATGAAAAAGAAGGAGAAAGAGAAAGATTTTGATATAATTGGGCATCAAGTTAACGAAGGTGCAGTTGAAGTTCAAGTAACTGCTCCTGTGAAAAGAGAAGCGGAACCAGTGAGAAAACATTCATCAAGCAGAAGGGGATCTTCATCTTTCCACGGTGTGAAGGGTGTTGGAGAAGTTGTGATGGTGAATGAGGAGAAGGGTGTTTTTGGGTTGCCGGATTTGATGAAGGCGGCCGCAGAGGTGCTGGGAAATGGAGGATTTGGATCGTCCTACAAAGCTGTGATGACGAATGGAGTAGCGGTGGTGGTGAAGAGGACAAGAGAGATGAATTCACTGGGAAAAGATGAATTTGATGCAGAGATTAGGAAGCTTGGAAATATGAAACACTGGAATATCTTGGCTCCTTTAGCTTATCATTACAGAAAGGATGAGAAACTAGTGATCTCTGAGTATGTTCCCAGAGGCAGTCTACTCTATTTGCTGCATGGTGATAGAGGACCATCACACGCTGAACTGGATTGGCCTGCTCGTTTAAAGATTGTAGGAGGAATTGCTGATGGGATGCATTATCTTCACACAGAACTTGCTTACTCAGATCTACCTCATGGAAATCTCAAGTCCAGCAATATTCTACTTGGACCAGATTATGAACCATTGCTTGTAGATTATGGGTTTGTCCATCTTGTTCACCCTTCAAATGCTCCACAAGCATTATTTGCTTATAAGGCTCCTGAAGCAGCACAACATGGCCAAGTTTCACCTAAGTGTGATGTTTATTGTTTTGGGGTTGTCATACTTGAGATACTCACTGGAAAGTTTCCTTCTCAATATCTTAGCAATGGCAAGGGCGGAACTGATGTAGTGCAATGGGTTGCCTCAGCAATTTCTGAGGGAAGGGAAGCAGAGTTACTTGATCCTGAAATTGCAAATTCTAGAAATTCAATGGGTGAAATGGAGAAGCTCCTTCATATTGGTGCAGCTTGCACTGAAAGTAACCCTCAGAAGCGATTAGACATGGCGGAAGCAGTTAGAAGGATAGAGGAGATAAAAGGCAAAGGTGGTCAAGAATCTAGAACAATAGAGGTGTTGCCATCTCCCACAGATGGCTATGCAGAATCTCAAATGTTTGATAACCAAGGGCACGGTGTCCAATCACAGAGGAGACATGAATCAAACAGCTTTGGAAGCCAGGATAAATTGGAATTTGGCATCTCCTAA 2154 0.4341 MHAWRGYKKTKEKEKRKNIMAAAPPSLFFIIITATTTIIITLPLVVHSISEAEALLRLKNSFSNAQSLDTWVAGSVPCTEDDNWEGVVCYNGLVTGLRLEQMGLFGEIDVDALLELQGLRTLSFMSNSFSGSIPQLNRIGFLKAIYLSGNKFSGEIPQDYFAGMRSLKKVWLSDNQFAGKIPVSLVDIPQLMELHLENNQFSGTIPDLKNPSLVKLNVSNNKLEGEVPASLLRFDDTSFQGNSGICGEKFGSCEKPKENTTAPNNAEPNNNGGGGIVVPEENKSWGGSMEIAAFVLASVVVISLVVICIVKSMKKKEKEKDFDIIGHQVNEGAVEVQVTAPVKREAEPVRKHSSSRRGSSSFHGVKGVGEVVMVNEEKGVFGLPDLMKAAAEVLGNGGFGSSYKAVMTNGVAVVVKRTREMNSLGKDEFDAEIRKLGNMKHWNILAPLAYHYRKDEKLVISEYVPRGSLLYLLHGDRGPSHAELDWPARLKIVGGIADGMHYLHTELAYSDLPHGNLKSSNILLGPDYEPLLVDYGFVHLVHPSNAPQALFAYKAPEAAQHGQVSPKCDVYCFGVVILEILTGKFPSQYLSNGKGGTDVVQWVASAISEGREAELLDPEIANSRNSMGEMEKLLHIGAACTESNPQKRLDMAEAVRRIEEIKGKGGQESRTIEVLPSPTDGYAESQMFDNQGHGVQSQRRHESNSFGSQDKLEFGIS* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1611 717 Pfam Protein kinase domain 392 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g1611 717 MobiDBLite consensus disorder prediction 256 279 - -
Lja3g1611 717 MobiDBLite consensus disorder prediction 662 717 - -
Lja3g1611 717 ProSiteProfiles Protein kinase domain profile. 388 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g1611 717 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 32 666 - -
Lja3g1611 717 Gene3D Phosphorylase Kinase; domain 1 366 463 - -
Lja3g1611 717 Pfam Leucine rich repeat 142 201 IPR001611 GO:0005515
Lja3g1611 717 CDD STKc_IRAK 394 661 - -
Lja3g1611 717 Pfam Leucine rich repeat N-terminal domain 50 89 IPR013210 -
Lja3g1611 717 Gene3D Ribonuclease Inhibitor 50 161 IPR032675 -
Lja3g1611 717 MobiDBLite consensus disorder prediction 683 711 - -
Lja3g1611 717 SUPERFAMILY L domain-like 49 233 - -
Lja3g1611 717 Gene3D Transferase(Phosphotransferase) domain 1 464 674 - -
Lja3g1611 717 Gene3D Ribonuclease Inhibitor 162 264 IPR032675 -
Lja3g1611 717 SUPERFAMILY Protein kinase-like (PK-like) 392 658 IPR011009 -
Lja3g1611 717 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 32 666 - -
Lja3g1611 717 MobiDBLite consensus disorder prediction 257 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1611 Lja-Chr3 17802569 17805436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1611 46 661 Receptor kinase-like Gene Family AT3G42880 46.457 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lja3g1611 Pkinase 1.5e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1611 - - lang:109337801 898.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1611 3 17802569 17805436 Lja3g1611 3 17802569 17805436 ECH