Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1610 ATGGACCCGCCGGAGACCTTGCCGTTAGAAGCGGCGGAGAAGATCATCCTCCGGTGGGACTCCACCGCCTCCGAAGACGCCCGTGAGAAGATGATATTCGACGGCGAACGTGAAGAAGTCGATCTCTACCTCCAAGCCGTCGACGAAATCCAACGCTCCATGTCCTCCACCACCATCTCCGACGACCAAGACAAAGCCACCTCCGCCATCCAGATCGCCATGGCTCGCTTAGAAGACGAGTTCCGCAACATCCTCATCTCCCACACCAACCCCATCGACCCAGCTTCCCCGTTTCTCCACCCCAACACCGAAGAAGACGAAGATCAACACCACCACCACCACCACTCTTCTTCTTCCTCCTCCACCCCCCAACGACTTCACCATGATGCTGTTGATGATGGCGGCGGCGATGTTGATGTTGATGTTGTTGACGACGGCAAGCTTCTCCGCTTCGACAGTGGCAGCTCTGTCGCTTCCTCCAGTGTCCGGAGCAGCTACCGCTCCACCAGCAGCATCCGCGAGATCGATCTGATACCCTCTGACGCAGTCTCCGACCTCCGCTGCATCGCCGAGAGGATGATCTCCTCCGGCTACCTCCGCGAGTGCATCCAGGTCTACGGCAGCGTGAGGAAATCCGCGGTGGATGCTAGCTTCAGGAGGCTCGGGGTTGAGAAGCTCAGCATCGGCGACGTTCAGAGGCTGGAGTGGGAGCAGCTGGAAGCCAAGATCAGGCGTTGGATAAGAGCTGCTAAGGTCTGCGTGAGAACCCTCTTCGCCAGTGAGAAGAGGCTCTGTGAGCAAATCTTTGATGGTGTGGGAACTGCGGTTGATGATGCTTGTTTCATGGAGACAGTGAAAGGGCCTGCAATTCAGCTTTTCAATTTTGCTGAGGCAATCAGTATAAGCAGGAGGTCGCCGGAGAAGCTATTCAAGATTCTTGACCTCCATGATGCCCTTAGGGATTTGATTCCTGACATTGATGTTGTTTTTGACTCGAAGTCGTCGGAGTCGATTCGTGTGCAGGCTGCGGAGATTCTCTCGCGATTAGCCGAGGCTGCAAGAGGGATTTTGTCTGAGTTTGAGAATGCTGTGCTTAGGGAGCCTTCTAAGGTTCCTGTCCCTGGTGGGACAATTCACCCTTTGACTAGGTATGTGATGAATTACATAAGTTTGATCTCTGATTACAAGATGACTTTGTATGAGCTTATAGTGTCTAAGCCGTCGACCGGGTCGAGATATTCGGGTGATCCTTCGACGCCGGATATGGATTTTACTGAGCTGGAGGGGAAGCCCCCTTTGGCTATTCATTTGATTTGGATTATTGTGATATTGCAATTCAACTTGGATGGTAAGTCCAAGCACTATAAGGATAACTCCTTGTCTCACCTTTTCATAATGAACAATGTCCACTACATTGTTCAGAAGGTGAGAGGCTCTCCTGAATTGAGGGAGATGATTGGAGATGATTACTTGAAGAAGCTTACAGGGAAGTTCAGGCAAGCTGCTACTAGCTACCAGAGAGCAACTTGGGTGAGGGTGTTGTATTGTTTGAGGGATGAAGGGTTGCATGTGAGTGGTGGCTTTTCTTCCGGGGTCTCGAAGAGTGCTTTGAGAGAAAGGTTCAAGGCCTTCAATGCTATGTTTGAGGAGGTTCACAGGACTCAAGCCGTGTGGTTGATACCGGATTCGCAGCTCAGGGAGGAGCTCAGGATATCTATATCGGAGAAGCTGATCCCGGCGTATAGGTCGTTCCTCGGGCGGTTCAGGAGCCACATAGAGAGCGGAAGACATCCGGAGAATTACATTAAGTATTCTGTTGAGGACCTGGAGGATGCTGTGTTGGATTTTTTTGAAGGAACTCCTGTTTCGCAGCACTTGAGAAGGAGATCTGAATGA 1896 0.5169 MDPPETLPLEAAEKIILRWDSTASEDAREKMIFDGEREEVDLYLQAVDEIQRSMSSTTISDDQDKATSAIQIAMARLEDEFRNILISHTNPIDPASPFLHPNTEEDEDQHHHHHHSSSSSSTPQRLHHDAVDDGGGDVDVDVVDDGKLLRFDSGSSVASSSVRSSYRSTSSIREIDLIPSDAVSDLRCIAERMISSGYLRECIQVYGSVRKSAVDASFRRLGVEKLSIGDVQRLEWEQLEAKIRRWIRAAKVCVRTLFASEKRLCEQIFDGVGTAVDDACFMETVKGPAIQLFNFAEAISISRRSPEKLFKILDLHDALRDLIPDIDVVFDSKSSESIRVQAAEILSRLAEAARGILSEFENAVLREPSKVPVPGGTIHPLTRYVMNYISLISDYKMTLYELIVSKPSTGSRYSGDPSTPDMDFTELEGKPPLAIHLIWIIVILQFNLDGKSKHYKDNSLSHLFIMNNVHYIVQKVRGSPELREMIGDDYLKKLTGKFRQAATSYQRATWVRVLYCLRDEGLHVSGGFSSGVSKSALRERFKAFNAMFEEVHRTQAVWLIPDSQLREELRISISEKLIPAYRSFLGRFRSHIESGRHPENYIKYSVEDLEDAVLDFFEGTPVSQHLRRRSE* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1610 631 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 6 630 - -
Lja3g1610 631 PANTHER EXOCYST COMPLEX PROTEIN EXO70 6 630 IPR004140 GO:0000145|GO:0006887
Lja3g1610 631 MobiDBLite consensus disorder prediction 100 115 - -
Lja3g1610 631 Pfam Exo70 exocyst complex subunit 245 613 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lja3g1610 631 Gene3D Exocyst complex component Exo70 15 127 - -
Lja3g1610 631 Gene3D Exocyst complex component Exo70 147 627 - -
Lja3g1610 631 SUPERFAMILY Cullin repeat-like 37 618 IPR016159 -
Lja3g1610 631 MobiDBLite consensus disorder prediction 92 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1610 Lja-Chr3 17791078 17794171 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1610 9 631 EXO70 exocyst subunit family AT1G72470 70.159 0.0 855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1610 K07195 - gmx:100808671 981.089