Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1603 ATGTCTACAACTGTGATCAGTGACCCGATGGTTATATCGGCGGTGCCGGAAGCTCAACCGGCTACAACTAGCATACTAGTTGCACAGAGCGATGTCGAATTCGCTGTCTGTGACTGCTGTGGACTAACAGAAGAGTGCACCCCAGCCTATATAGAACGAATTAGAGAGCGCTACCACGGGAAATGGGTTTGCGGGTTGTGCGCTGAAGCCATTAAGGATGAGATTGTGAGGTCTGAGAGGCTTGTCAGCACGGAAGAAGCAATGATGAAGCACATGAACTTCTGCAAAAAGTTCAACTCATCAGGGCCTCCTCCAAACCCAGCAGTGCATTTGATATCAGCTATGAGACAGATTCTGCGGAGGAGTTTGGATTCTCCAAGAGTTAGGTCCACACCAAGCAGTCCAACTAAGAAGACGAGCCGAGCAATTCGCGGCGGCAGCTCGGGGCTTGCCAGGTCTGAGAGCTGCTTCTCTACTCTCTCTGGTGTTCCTGATGGGATTGGGATTGGAATAGAACAAGATGCAACACTGGGAATACTGTAA 543 0.5009 MSTTVISDPMVISAVPEAQPATTSILVAQSDVEFAVCDCCGLTEECTPAYIERIRERYHGKWVCGLCAEAIKDEIVRSERLVSTEEAMMKHMNFCKKFNSSGPPPNPAVHLISAMRQILRRSLDSPRVRSTPSSPTKKTSRAIRGGSSGLARSESCFSTLSGVPDGIGIGIEQDATLGIL* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1603 180 MobiDBLite consensus disorder prediction 123 153 - -
Lja3g1603 180 PANTHER OS01G0745000 PROTEIN 14 160 IPR012876 -
Lja3g1603 180 MobiDBLite consensus disorder prediction 124 143 - -
Lja3g1603 180 Pfam Protein of unknown function (DUF1677) 32 121 IPR012876 -
Lja3g1603 180 PANTHER DUF1677 FAMILY PROTEIN (DUF1677) 14 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1603 Lja-Chr3 17687445 17689336 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1603 - - lja:Lj3g3v2576730.1 346.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1603 3 17687445 17689336 Lja3g1603 3 17687445 17689336 ECH
Lja3g1603 3 17687445 17689336 Lja1g3990 1 50654205 50655104 ECH
Lja3g1603 3 17687445 17689336 Lja5g2946 5 57955055 57955474 ECH