Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1602 ATGAAGCCGCTAAATGGGTTATTCGGTGCAAGACGTAGAAAGTTTCATAGAATTTTCAATGGCTTGTGTGCTATGGTTGTGTTTTTCTTCTTTTACAATAGGGATGACATCCTTCGCAATCCGCTTCTTAGGCATAATACATATTTTGGGTTTCAGAATTTGTCTCAAAATGCTTTTTTTAGAGATGGGGGTTATGTGATTCACCGCCGGTTGGCTCAGATTAGCTCAAACGCTTCGAGTGTAGCCGGTGAGCTGCGCAGTGACGAAGATTTAGCTGTAAGTAAGCCTGGATTCTGTACTGGATTGCTCCGCCATGATGGTTTTGATAGTTCATGTGAATTCTTAAAGGCTAATCCTCAGTGCTCTTCTGAGGGGTATCTTGATTACTTGGGGTTTTTCTATTGTAAATGTGGGAATTTTAGTGTGCTTGGTTATCTAGTGTTAGGGGTGTGGCTTGCTGCTTTGTTTTATCTCTTGGGGAATACTGCAGCGGATTATTTCTGCCCTTCGCTCGAGCATCTCTCGAGGCTCTTGAAGTTGCCTCCGACTGTGGCAGGGGTTGTGCTGCTCCCGCTTGGGAATGGGGCGCCTGATGTGTTTTCCAGTATAGCTTCGTTTGTGGGTACGGAAGCGGGTGAGGTTGGGCTTAACAGCGTGTTAGGCGGTGCTTTGTTTGTTACTACTGTTGTTGTTGGAACTGTTTCTCTATGTGTTGCTGAGAGGGAGATTCAAATTGATCGAAGATGCTTTATCAGGGATGTGTGTTTCTTCCTGCTCACTCTTGCTTCACTGCTTCTGATTTTGGTTATCGGCAAGGTGGGCGTTGGGGGAGCCATTGCTTTTGTGTCGATTTATGTTTTTTATGCATCCATTGTAGCTGCCAATGAGATATTACGGAAACATGCACGGAGGTTGAAGTTGGATTCTGTCACACCACTGCTTCCTGTCCAGGGAAGTATGTTCTCTCTTGGTTCCGAAGAGGATACTTCTGTGTATAGCTCTTTGCTTGACTTAGACACTGAGAGTGATCCTCCTCGTCTCCCTCCTGCCTTGCCACAGTGGATGTGGTCCTCAAATGTGGCCATATATTCAAACCAGGCCAATAAAATCAATTCTTCAGATCATGAAAGGCCTCCTTGGGGTTGGAGTGATGGGTCCACGGAAAATACCAGCTCATCGTTCTCTGTTTCGAAACTTTTTTTGCTGATGGAGATGCCACTGGAAATTCCTAGACGGCTAACAATTCCAATGGTCAATGAAGAAGTATGGTCGAAGCCGTATGCTGTGGCCAGTGCTTCATTGGCTCCCATTTTCCTAGCCTTTTTGTTTAGCACCCAAGATGATGTGAGTTCTAAGAGTATTATACTTGCTTATTTTTTTGGTGTTGCTGTTGGATGCACGCTTGGTATTCTCGCATATAAAAACACAGTGCCTGATCATCCACCACCTCAGTTTTTACTTCCCTGGGTTCTTGGAGGATTCCTCATGAGCATAGTGTGGTTCTACATAATAGCAAATGAGCTTGTGGCTCTATTAGTAGCATTTGGTTTAATTTTCGGAATTAATCCATCCATCCTGGGATTAACTGTATTAGCATGGGGAAACTCAATGGGAGATTTGATGTCAAATGTTGCACTGGCAATGAATGGAGAAGATGGAGTTCAGATTGCTTTATCTGGATGCTATGCAGGTCCTATGTTCAACACGCTTGTTGGTTTGGGGATCTCGTTGCTGCTTGGGGCCTGGTCAAAGAAACCTTCATTGTACTCGGTGCCGAAAGATAGTAGCTTATTTTACACCCTGGGGTTTCTGATCACGGGATTGATGTGGGCACTTGTTGTTTTACCACGCAACAATATGCACCCTAACAGAATGCTAGGAATGGGTCTCATCGCCCTTTATTTGATATTTCTTTCTTTCAGAGCGTGCACTGGTATGGGGCTGATAACAGTTGCTGGTTTAAGTTGA 1968 0.4451 MKPLNGLFGARRRKFHRIFNGLCAMVVFFFFYNRDDILRNPLLRHNTYFGFQNLSQNAFFRDGGYVIHRRLAQISSNASSVAGELRSDEDLAVSKPGFCTGLLRHDGFDSSCEFLKANPQCSSEGYLDYLGFFYCKCGNFSVLGYLVLGVWLAALFYLLGNTAADYFCPSLEHLSRLLKLPPTVAGVVLLPLGNGAPDVFSSIASFVGTEAGEVGLNSVLGGALFVTTVVVGTVSLCVAEREIQIDRRCFIRDVCFFLLTLASLLLILVIGKVGVGGAIAFVSIYVFYASIVAANEILRKHARRLKLDSVTPLLPVQGSMFSLGSEEDTSVYSSLLDLDTESDPPRLPPALPQWMWSSNVAIYSNQANKINSSDHERPPWGWSDGSTENTSSSFSVSKLFLLMEMPLEIPRRLTIPMVNEEVWSKPYAVASASLAPIFLAFLFSTQDDVSSKSIILAYFFGVAVGCTLGILAYKNTVPDHPPPQFLLPWVLGGFLMSIVWFYIIANELVALLVAFGLIFGINPSILGLTVLAWGNSMGDLMSNVALAMNGEDGVQIALSGCYAGPMFNTLVGLGISLLLGAWSKKPSLYSVPKDSSLFYTLGFLITGLMWALVVLPRNNMHPNRMLGMGLIALYLIFLSFRACTGMGLITVAGLS* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1602 655 Pfam Sodium/calcium exchanger protein 490 640 IPR004837 GO:0016021|GO:0055085
Lja3g1602 655 Pfam Sodium/calcium exchanger protein 150 291 IPR004837 GO:0016021|GO:0055085
Lja3g1602 655 Gene3D - 180 311 IPR044880 -
Lja3g1602 655 Gene3D - 428 643 IPR044880 -
Lja3g1602 655 PANTHER CATION/CALCIUM EXCHANGER 4 10 651 - -
Lja3g1602 655 MobiDBLite consensus disorder prediction 370 389 - -
Lja3g1602 655 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 10 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1602 Lja-Chr3 17679809 17682415 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1602 99 647 Antiporters AT5G17850 42.029 1.84e-123 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1602 K13754 - gmx:100796101 1051.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1602 3 17679809 17682415 Lja3g1602 3 17679809 17682415 ECH