Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1601 ATGGCTTCTCCTTCTTTCTCTCTTTTCCTCTTCTTCTCCTCCTTCTTCCTTTTCTTCACTCTCTCTCTTTCATCATCAGACGCTCCACAAACCTTCATCATCCACGTGGCACGATCAGACAAACCCACCCTCTTCTCCACCCACCACCACTGGTACACCTCCATCCTCCGCTCCCTCCCTCCCTCCTCTCACCCCACTGACATCCTCTACACCTACGACTCCGCCGTCAACGGCTTCTCCGTCCGGTTAACCCCCGCCCAAGCCGCCACCCTCCGCCGCCACCCCAGCATCCTCGCCGTCGAGCCCGACCAAATCCGCCACCTCCACACCACCCACACCCCCACCTTCCTCGGCCTCGCCGACACCACCGGATTATGGCCAAACTCCCACTACGCTGACGACGTCATCGTCGGCGTCCTCGACACCGGAATCTGGCCGGAGCGACGAAGCTTCTCCGACTCCGGCCTCTCCGCCGTCCCCTCCTCCTGGAAAGGAACCTGCGAAATCAGCCATGACTTCCCTGCTTCTTCCTGCAACGGAAAAATCATCGGCGCTAAAGCGTTCTACAAAGGCTATGAATCTTACATCCAGAGACCCATTGACGAGTCTGTTGAATCGAAATCGCCCAGAGACACTGAAGGCCACGGTACCCACACTGCCTCCACCGCCGCAGGCTCCGTCGTGAAGAACGCTAGCTTGCTCCACTATGCGCAAGGCGAAGCAAGAGGAATCGCCTCTAAGGCGAGAATCGCCGCATACAAGATCTGCTGGAGCCTGGGGTGTTTCGACTCCGACATTCTCGCCGCCATGGATGAAGCTGTTTCCGATGGGGTTCATGTAATCTCCCTCTCCGTTGGATCCTCCGGCTACGCACCGCAGTACTACCGTGACTCCATCGCTGTTGGGTCATTCGGCGCGGCGCAGAGCGGCGTCGTTGTGTCTTGCTCTGCCGGGAACTCAGGACCCGGTCCTTACACTGCTACCAACATCGCTCCTTGGATTTTGACAGTTGGAGCTTCAACCGTTGACAGAGAGTTTCCGGCGGATGTGATTCTCGGCGACGGTAAAGTCTACGGTGGTGTTTCTTTGTATTACGGCAATGGTTTGCCGGATTATAAGCTTCCTCTGGTGTACGCTGCGGATGCTGGAAGCAGATACTGCTACATGGGGAGTCTGTTATCTTCCAAGGTTCAAGGGAAGATTGTTGTCTGCGATCGTGGAGGGAACGCGAGAGTTGAGAAAGGGAGTGCGGTGAAGTTTGCAGGTGGGTTGGGAATGATCTTGGCGAACACAGCTTCTAGCGGCGAAGAGCTTCTAGCTGATGCTCATCTTCTAGCAGCAACAATGGTGGGTCAGAAAGCTGGTGACAAGATCAAAGAGTATATAAGATTGAGTCAATACCCAACAGCAACTATCAAATTCAAAGGGACTGTGATTGGGAACTCACCTTCTGCTCCTAAAGTTGCTTCGTTTTCGAGCCGCGGTCCGAATTATCGCACTTCAGAGATTCTCAAACCAGATGTTATAGCTCCTGGGGTGAACATTTTAGCAGGGTGGACAGGAAAAGTTGGACCAACTGATTTGGATTTTGATCCTAGGAGGGTTGAGTTTAACATAATTTCAGGTACTTCAATGTCATGTCCTCATGTTAGTGGAGTTGCAGCATTGTTGAGGAAAGCCTATCCAAATTGGTCACCTGCTGCTATAAAATCAGCTTTGATGACTACAGCTTATGATGTGGATAATTCTGGTGGGATTATTGGGGATCTTGGAACTGGAAGAGAGTCAAATGCTTTCATTCATGGAGCTGGACATGTTGATCCAAACAAGGCTTTGAATCCTGGGTTGGTTTATGATTTGGATGGTTCTGACTATCTTGCATTCTTGTGTTCAATTGGGTATGATGCTAGGCAAATTCAGGTTTTCACAAGAGAGCCTACTGGTTCTGACATTTGTGGGAAAAAACTAGCTAGGACTGGGAGATTGAATAGTCCTGGTGATTTGAATTACCCATCTTTCTCTGTGGAATTTGGTGCCTACAAAAGCTTGGTTAAGTACAATCGTGTTGTTACTAATGTGGGAGGCTCAGATGATGCTGTTTACAATGTCAAGGTGAATGCTCCTAATGGTGTTGATGTCAGTGTCTCACCAAGCAAGCTTGTGTTCAGTGCTGAGAACAAGACACAGGCTTTTGAGGTCACTTTCACTAGAGTTGGGTATGGTGGCTCTCAGAGTTTTGGGTCCATTGAGTGGAGTGATGGAAGTTACCGTGTGAGGAGCCCAATTGCTGTGAGTTTTAGCAGTGGATCCTCATCATCATCATCCATGTGA 2331 0.5075 MASPSFSLFLFFSSFFLFFTLSLSSSDAPQTFIIHVARSDKPTLFSTHHHWYTSILRSLPPSSHPTDILYTYDSAVNGFSVRLTPAQAATLRRHPSILAVEPDQIRHLHTTHTPTFLGLADTTGLWPNSHYADDVIVGVLDTGIWPERRSFSDSGLSAVPSSWKGTCEISHDFPASSCNGKIIGAKAFYKGYESYIQRPIDESVESKSPRDTEGHGTHTASTAAGSVVKNASLLHYAQGEARGIASKARIAAYKICWSLGCFDSDILAAMDEAVSDGVHVISLSVGSSGYAPQYYRDSIAVGSFGAAQSGVVVSCSAGNSGPGPYTATNIAPWILTVGASTVDREFPADVILGDGKVYGGVSLYYGNGLPDYKLPLVYAADAGSRYCYMGSLLSSKVQGKIVVCDRGGNARVEKGSAVKFAGGLGMILANTASSGEELLADAHLLAATMVGQKAGDKIKEYIRLSQYPTATIKFKGTVIGNSPSAPKVASFSSRGPNYRTSEILKPDVIAPGVNILAGWTGKVGPTDLDFDPRRVEFNIISGTSMSCPHVSGVAALLRKAYPNWSPAAIKSALMTTAYDVDNSGGIIGDLGTGRESNAFIHGAGHVDPNKALNPGLVYDLDGSDYLAFLCSIGYDARQIQVFTREPTGSDICGKKLARTGRLNSPGDLNYPSFSVEFGAYKSLVKYNRVVTNVGGSDDAVYNVKVNAPNGVDVSVSPSKLVFSAENKTQAFEVTFTRVGYGGSQSFGSIEWSDGSYRVRSPIAVSFSSGSSSSSSM* 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1601 776 Gene3D - 343 479 - -
Lja3g1601 776 SUPERFAMILY PA domain 370 459 IPR046450 -
Lja3g1601 776 Pfam Subtilase family 133 583 IPR000209 GO:0006508|GO:0008236
Lja3g1601 776 SUPERFAMILY Subtilisin-like 108 616 IPR036852 GO:0004252|GO:0006508
Lja3g1601 776 CDD PA_subtilisin_like 349 472 - -
Lja3g1601 776 Pfam Fibronectin type-III domain 667 764 IPR041469 -
Lja3g1601 776 SUPERFAMILY Protease propeptides/inhibitors 29 108 - -
Lja3g1601 776 CDD Peptidases_S8_3 107 578 IPR034197 -
Lja3g1601 776 Pfam Peptidase inhibitor I9 31 109 IPR010259 -
Lja3g1601 776 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 109 IPR037045 -
Lja3g1601 776 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 19 768 IPR045051 -
Lja3g1601 776 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.6 19 768 - -
Lja3g1601 776 Gene3D - 629 767 - -
Lja3g1601 776 ProSitePatterns Serine proteases, subtilase family, serine active site. 542 552 IPR023828 -
Lja3g1601 776 PRINTS Subtilisin serine protease family (S8) signature 211 224 IPR015500 -
Lja3g1601 776 PRINTS Subtilisin serine protease family (S8) signature 132 151 IPR015500 -
Lja3g1601 776 PRINTS Subtilisin serine protease family (S8) signature 541 557 IPR015500 -
Lja3g1601 776 ProSiteProfiles Serine proteases, subtilase domain profile. 114 612 - -
Lja3g1601 776 Gene3D Peptidase S8/S53 domain 134 625 IPR036852 GO:0004252|GO:0006508
Lja3g1601 776 Pfam PA domain 374 458 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1601 Lja-Chr3 17669062 17672093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1601 7 773 Subtilisin-like Serine Gene Family AT3G14067 66.495 0.0 1030
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1601 - - gmx:100793990 1230.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1601 3 17669062 17672093 Lja3g1601 3 17669062 17672093 ECH