Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1597 ATGGCAACACAATTAGCAGCAGTTCCTAGTTATTGGGTCACAACTGCAGCCACATGCCTTGCAGCCTTTGCTATCCTCCTCCTCTTCAAGCGACGGCAGAACAGCCACAACAAATACAATCTACCACCGGGCCCAAAACCATGGCCTATCATAGGAAACCTCAACCTCATAGGACCACTCCCGCACCGGTCCATCCACACTCTAAGCCAGAAGTATGGACCCATCGTGCATGTCTGGTTCGGCTTCAACCCCGTTGTCGTGGGTTCCTCCGTGGACATGGCCAAAGCCATCCTCAAAACCCACGATGCCACCCTTGCAGACCGGCCCAAATTTGCAGCCGGAAAATACATAGCCTACAACTACTCAGACATAACTTGGTCCCAATATGGCCCATACTGGCGCCAAGCCCGTAGATTGTGCTTGATGGAACTGTTCAGTGCAAAACGCCTCGATTCCTATGAGTATATTAGAAAGCAAGAGATGAGTGCTTTTTTAAATGATCTCTTCTTCAATTTCGCAAACAAAACAATCTTGTCGAAAGACCATCTTTCAACTCTGAGCCTGAACGTGATTAGCCGCATGGTGTTGGGGAAGAAGTACTCGGAGAAGAGTGAGAACTCCATAATTTCCCCTGAGGAGTTCAAGAAGATGCTCGATGAGTTGTTTTTGCTGAACAGGGTTTACAACATTGGGGACTTCATCCCGTGGATTGATTTCTTGGACTTGCAGGGTTACATTAAAAGGATGAAGGCTTTGGGGAAAAAGTTTGATATGTTCATGGAGCATGTGTTGGAGGAACACATTGAGAGAAGGAAAGGGGTGAAGGATTATGTTGCCAAAGACATGGTGGATGTGCTTTTGCAACTTGCTGAGGATCCTACTCTTGAGGTCAAGCTAGAGAGGCGTGGAGTAAAAGCTTTTACTCAGGACCTAATAGCAGGTGGGACAGAGAGCTCTGCCGTAACTGTAGAATGGGCAATCACTGAGCTCTTGAGAAAACCAGAGATCTTCAAGAGAGCAACAGAGGAGCTAGACAGGGTGGTAGGGAGAGAAAGATGGGTTGAAGAGAATGACATTGCAAATTTACCTTATGTTAATGCAATTGTTAAAGAAGCGATGCGGTTTCACCCTAGTGCACCAATGTTAGTGCCAAGACTAGCACGAGAGGACTGCAACATTGGTGGGTATGATATCCCCAAAGGAACACAAGTGCTTGTCAATACTTGGACTATTAGTAGAGATCCTGAAATTTGGGACAATCCAACCGAATTCAAACCAGAGAGGTTTATAGGGAAGGAGATTGACGTGACAGGCCATGGCTTTGAGTTGTTGCCATTTGGTGCGGGTAGAAGGATTTGTCCTGGGTACCCTCTTGGCCTTAAAGTAATTCAAGCAAGTTTGGCCAATCTGTTGCATGGCTTTAACTGGAGACTGCCTGATACTATAAAGAAGGAGGACTTGAACACGGAAGAGATTTTTGGGTTGTCCACACCTAAGAAAATACCTTTAGAAGTTGTTGTTGAGCCTAGACTCCCAAACCATCTCTATTCCCTCTAA 1557 0.4611 MATQLAAVPSYWVTTAATCLAAFAILLLFKRRQNSHNKYNLPPGPKPWPIIGNLNLIGPLPHRSIHTLSQKYGPIVHVWFGFNPVVVGSSVDMAKAILKTHDATLADRPKFAAGKYIAYNYSDITWSQYGPYWRQARRLCLMELFSAKRLDSYEYIRKQEMSAFLNDLFFNFANKTILSKDHLSTLSLNVISRMVLGKKYSEKSENSIISPEEFKKMLDELFLLNRVYNIGDFIPWIDFLDLQGYIKRMKALGKKFDMFMEHVLEEHIERRKGVKDYVAKDMVDVLLQLAEDPTLEVKLERRGVKAFTQDLIAGGTESSAVTVEWAITELLRKPEIFKRATEELDRVVGRERWVEENDIANLPYVNAIVKEAMRFHPSAPMLVPRLAREDCNIGGYDIPKGTQVLVNTWTISRDPEIWDNPTEFKPERFIGKEIDVTGHGFELLPFGAGRRICPGYPLGLKVIQASLANLLHGFNWRLPDTIKKEDLNTEEIFGLSTPKKIPLEVVVEPRLPNHLYSL* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1597 518 Pfam Cytochrome P450 42 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1597 518 Gene3D Cytochrome P450 34 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1597 518 SUPERFAMILY Cytochrome P450 42 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1597 518 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1597 518 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1597 518 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1597 518 PANTHER CYTOCHROME P450 98A9 11 517 - -
Lja3g1597 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Lja3g1597 518 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1597 518 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1597 518 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1597 518 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1597 518 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1597 518 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1597 518 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1597 518 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1597 518 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1597 Lja-Chr3 17555428 17558476 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1597 17 518 Cytochrome P450 AT5G07990 42.436 1.50e-142 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1597 K20623 - gmx:100791502 896.73