Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1545 ATGGCAGCGCACCACTCTCCCGATCACGAACCAACCTCCGAACCCAACCTCCAAACCCGACCCTACAACCCCTACAAGGACCTCGACGTCCCAATCCGAAACCTCTACCACCTCCCTACCTCCCCGGAGTTTCTCTTCGTCGAGGAAGCTCGCCGCAAACGCCGATCCTGGGGCGAGAATCTCACCTTCTACACCGGATGCGGCTACCTCGCCGGTGCCGTCGCCGGAGCTGGTGTCGGCCTTGTTGAAGGTGTAAAATCCTTCGAATCCGGCGACACTGCGAAGCTCCGAATCAACCGCATCCTCAACTCCTCCGGTCATTCGGGTCGAACATGGGGGAACCGGGCTGGGATCATCGGGCTGCTGTACGCTGGGATTGAGAGTGGGATTGAGGCTGCTAGGGATACTGATGATGTGTGGAACAGCGTGGCGGCGGGGTTAGGAACTGGTGCGCTGTATCGAGCCGCGAGAGGGGTGCGATCCGCCGCGGTGGCTGGTGCTGTGGGTGGCATTACAGTGGGTGCGGCTATGGCGATGAAGCAGGCATTGAAACGATATGTGCCGATATGA 570 0.6 MAAHHSPDHEPTSEPNLQTRPYNPYKDLDVPIRNLYHLPTSPEFLFVEEARRKRRSWGENLTFYTGCGYLAGAVAGAGVGLVEGVKSFESGDTAKLRINRILNSSGHSGRTWGNRAGIIGLLYAGIESGIEAARDTDDVWNSVAAGLGTGALYRAARGVRSAAVAGAVGGITVGAAMAMKQALKRYVPI* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1545 189 Pfam Tim17/Tim22/Tim23/Pmp24 family 63 171 - -
Lja3g1545 189 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23 14 189 - -
Lja3g1545 189 PANTHER TIM23 14 189 IPR045238 GO:0022857
Lja3g1545 189 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1545 Lja-Chr3 16857693 16858793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1545 1 189 Chloroplast and Mitochondria Gene Families AT1G72750 71.354 9.02e-83 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1545 K17794 - gmx:100777112 269.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g5006 3 92168548 92169601 Lja3g1545 3 16857693 16858793 PCT