Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1529 ATGGCGAAGGGGAGGATAAGGGCGAGGCTCCGGAGGAGCAATTTTTATACGTTTGGCTGCCTTCGGCCTGCGACCACCGAGGATGTGCCTCATCCGCTTCAAGGTCCGGGGTACTCGCGGACGGTGTGTTGCAACCAGCCTCATCTCCATGAAAAGAGACCTCTACATTACTGCAAGAATGATATATCCACGACCAAGTACAATGTTATTACATTTTTCCCCAAGGCACTCTTTGAGCAGTTTCGTAGGGTCGCTAACATATACTTCCTCTTGGCTGCGTGCCTCTCAGCCTCTCCAATTTCACCTTTCAGCCCACTGAGCATGATTGCTCCCTTGGCATTTGTTGTGGGGCTTAGTATGGCAAAGGAAGCGTTGGAAGACTCACGCAGGTTCCTTCAGGATGTCAAAGTTAACCGCCGGAAAGTTTATCACCATAAAGGCAATGGTGTCTTCGGTCCCAGGTCGTGGCAGAACATTATGGTTGGAGATGTGGTGAAAGTAGAAAAGGACAAGTTTTTCCCAGCTGATTTGCTTCTCTTGGCATCAAGTTATGAGGATGGGATATGCTATGTGGAGACGATGAATTTAGATGGTGAGACCAACCTAAAGGTGAAAAGATCTCTGGAGCCTACCTTGTCTCTAGATAATGATGAGTCTTTTAAGGATTTCACTGCAACAATACGATGTGAAGACCCAAACCCCAATCTTTACACCTTTGTTGGAAACTTTGAGTATGAACGCCAGATTTATCCTCTTGATCCTAGTCAAGTTCTCCTCCGAGATTCTAAGCTCAGAAACACTGATTACATCTATGGGGTGGTCATCTTCACCGGTCATGACAGCAAAGTCATGCAGAACGCCACAAGATCCCCTTCAAAAAGGAGTACAGTAGAAAAGAAGATGGATTATATCATATACACTCTCTTCACTGTCCTTATTTTGATATCCGTCATTAGTTCCATAGGATTTATGATCAAGACTAAGTACCAAACAACAGAGTGGTGGTACATACGTCCTGACAATATTGAGTACCAGTATGATCCCCATAAAGTTGGAGTGGCTGGGATGAGTCATCTGATTACTGCACTCATTCTTTATGGGTATTTGATACCAATCTCGCTTTATGTTTCCATTGAGGTTGTGAAGGTCTTACAGGCAACCTTTATTAACCAAGACATTCAAATGTATGATGATGAAACCGGGACTCCAGCTGACGCACGGACTTCAAATTTGAATGAAGAGTTGGGTCAGGTAGACACTATACTCTCTGATAAAACTGGCACTTTAACCTGCAATCAGATGGACTTTTTGAAGTGCTCCATTGCTGGTATTGCATATGGTGTGCGTGCCAGTGAAGTTGAACTTGCTGCTGCAAAGCAGATGGCTTCTGATATTGATGACCTGGATTCAGACCTCTCCAATTTCCCCTTGCCTAAGACTAAAAAGCAAGTTTCATTGAAAAATGTCAAAAGATCTGAAGAAATTGAACTGGAGACTGTTGTTACTTCCAAAGGTGATGAAGATCAAAGATATGCCATAAAGGGATTTGGTTTTGAAGATGACCGCCTCATGAATGGTAATTGGTTGAGAGAGCCGAATGCCGATGTAATTTTGCTGTTTTTCCGCATATTAGCAGTTTGTCATACTGCCATTCCTGAGGTGAATGAGGAGACGGGCAATTTTACATATGAAGCTGAGTCACCTGATGAAGGATCCTTTCTCGTAGCAGCGAGAGAATTTGGCTTTGAGTTTTGTAAGAGGACTCAGTCAAGTATTTTCGTACGAGAAAGAGTTTCTGAGTCAGAGCAAGTTGTTGAAAGGGAGTACAAACTCTTGAATCTGCTGGATTTCACGAGTAAAAGAAAGCGTATGTCGGTGATTGTGCGTGATGAGGAGGGCAAAATTTTTCTTCTGTGCAAAGGAGCTGACAGTATCATATTTGATCGTTTGTCCAAGAATGGGAAAATGTATTTGGAGCCTACTACCAGACATTTAAATGATTATGGAGAAGCTGGTTTGCGAACACTAGCTCTGGCTTATAGAAGGCTCGATGAGCAAGAGTACTCTGCTTGGAACAATGAGTTTCAGAAAGCCAAAGCAACTGTTGGGGCTGACAGAGATTCAATGCTTGAACGAGTGTCAGAGCTTATGGAAAAAGAGTTGATTCTTGTTGGAGCCACTGCTGTTGAAGACAAACTGCAGAAAGGGGTTCCCCAATGTATTGATAAACTTGCTCAAGCTGGTCTCAAGATCTGGGTATTGACGGGGGATAAGATGGAAACTGCAATCAACATTGGATTTGCCTGCAGTTTGCTTCGACAGGGCATGAAGCAGATATGTATAAGTACAAATTCAGACTCAGGATCCAATGATGTCAAAAAGGCCATCAAGGATGACATTTTGAATCAAATCACGAATGCTTCTCAAATGATAAAGCTGGAGAAGGATCCTCATGCTGCCTTTGCATTAATTATTGATGGAAAAACTCTGACATATGCTTTAGAAAATGATATGAAGCACCAATTTTTGGGATTGGGAGTTGATTGTGCATCTGTCATCTGCTGTCGTGTGTCTCCCAAGCAAAAGGCATTGGTAACAAGGTTGGTGAAAGAAGGAACTGGCAAGACAACTCTAGCAATAGGTGATGGTGCAAATGATGTTGGCATGATTCAAGAAGCAGATATTGGTGTTGGAATCAGTGGGGTTGAAGGTATGCAGGCAGTGATGGCTAGTGATTTCTCAATTGCACAATTTCGCTTCTTGGAGCGACTTCTGGTAGTCCATGGACACTGGTGTTACAAAAGAATCGCACAAATGATCTGTTATTTCTTCTACAAGAATATAGCATTTGGCCTCACCATCTTCTATTTTGAGGCCTTCACAGGCTTCTCTGGCCAATCGGTTTATGATGACTGGTACATGATATTGTTCAATGTTGTTCTGACATCATTACCCGTCATTTCACTTGGCGTTTTTGAACAAGATGTGCCTTCAGAAGTTTGTTTACAGTTTCCTGCACTTTATCAACAAGGACCCAAAAATTTGTTCTTTGACTGGTATAGAATATTGGGATGGATGGGAAATGGAGTCTATTCATCCCTCATCATTTTTTTCCTCACCATCACCATCTTCTACGACCAAGCATTCCGAGTCGATGGCCAGACCGCTGACATGGCTGCTGTGGGAACCACAATGTTCACCTGCATCATCTGGGCAGTGAACTGCCAGATTGCACTGACAATGAGCCATTTTACATGGATTCAGCACCTGTTTGTATGGGGCAGCATAAGCACTTGGTACGTCTTTCTCGTGTTATACGGCATGCTTTCCCCTGTGTATTCCAAGAATGCCTACCAACTTCTGGTTGAAGCCCTTGGTCCCGCGCCTATTTATTGGTCAGCAACACTTCTGGTTACAATTACATGCAATCTTCCTTATCTTGCCCACATATCATTCCAAAGATGTTTCAACCCCATGGATCATCACATTATCCAAGAAATCAAGTACTACAAGAAGGACATTGAGGACCAACACATGTGGACAAGGGAGCGTTCTAAAGCCAGGCAAGAAACCAAGATTGGTTTCACTGCAAGAGTAGAGGCCAAAATCAGACAATTGAAGGGGAAGCTGCAGAAGAAGCAATCTTCCTTGACTTGTATGTCCCCATCGTGA 3672 0.4325 MAKGRIRARLRRSNFYTFGCLRPATTEDVPHPLQGPGYSRTVCCNQPHLHEKRPLHYCKNDISTTKYNVITFFPKALFEQFRRVANIYFLLAACLSASPISPFSPLSMIAPLAFVVGLSMAKEALEDSRRFLQDVKVNRRKVYHHKGNGVFGPRSWQNIMVGDVVKVEKDKFFPADLLLLASSYEDGICYVETMNLDGETNLKVKRSLEPTLSLDNDESFKDFTATIRCEDPNPNLYTFVGNFEYERQIYPLDPSQVLLRDSKLRNTDYIYGVVIFTGHDSKVMQNATRSPSKRSTVEKKMDYIIYTLFTVLILISVISSIGFMIKTKYQTTEWWYIRPDNIEYQYDPHKVGVAGMSHLITALILYGYLIPISLYVSIEVVKVLQATFINQDIQMYDDETGTPADARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGIAYGVRASEVELAAAKQMASDIDDLDSDLSNFPLPKTKKQVSLKNVKRSEEIELETVVTSKGDEDQRYAIKGFGFEDDRLMNGNWLREPNADVILLFFRILAVCHTAIPEVNEETGNFTYEAESPDEGSFLVAAREFGFEFCKRTQSSIFVRERVSESEQVVEREYKLLNLLDFTSKRKRMSVIVRDEEGKIFLLCKGADSIIFDRLSKNGKMYLEPTTRHLNDYGEAGLRTLALAYRRLDEQEYSAWNNEFQKAKATVGADRDSMLERVSELMEKELILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICISTNSDSGSNDVKKAIKDDILNQITNASQMIKLEKDPHAAFALIIDGKTLTYALENDMKHQFLGLGVDCASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTIFYFEAFTGFSGQSVYDDWYMILFNVVLTSLPVISLGVFEQDVPSEVCLQFPALYQQGPKNLFFDWYRILGWMGNGVYSSLIIFFLTITIFYDQAFRVDGQTADMAAVGTTMFTCIIWAVNCQIALTMSHFTWIQHLFVWGSISTWYVFLVLYGMLSPVYSKNAYQLLVEALGPAPIYWSATLLVTITCNLPYLAHISFQRCFNPMDHHIIQEIKYYKKDIEDQHMWTRERSKARQETKIGFTARVEAKIRQLKGKLQKKQSSLTCMSPS* 1224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1529 1223 Gene3D - 720 920 IPR023214 -
Lja3g1529 1223 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1219 - -
Lja3g1529 1223 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 853 961 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lja3g1529 1223 Gene3D - 591 702 IPR023299 GO:0000166
Lja3g1529 1223 SUPERFAMILY Calcium ATPase, transmembrane domain M 51 1151 IPR023298 -
Lja3g1529 1223 Pfam Cation transport ATPase (P-type) 546 651 - -
Lja3g1529 1223 Gene3D - 113 289 - -
Lja3g1529 1223 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 57 1166 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Lja3g1529 1223 SFLD p-type atpase 405 931 IPR044492 -
Lja3g1529 1223 CDD P-type_ATPase_APLT_Dnf-like 60 1040 - -
Lja3g1529 1223 Pfam Phospholipid-translocating P-type ATPase C-terminal 908 1158 IPR032630 -
Lja3g1529 1223 SFLD Haloacid Dehalogenase 405 931 - -
Lja3g1529 1223 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1219 - -
Lja3g1529 1223 SUPERFAMILY Calcium ATPase, transduction domain A 144 287 IPR008250 -
Lja3g1529 1223 ProSitePatterns E1-E2 ATPases phosphorylation site. 424 430 IPR018303 -
Lja3g1529 1223 PRINTS P-type cation-transporting ATPase superfamily signature 422 436 - -
Lja3g1529 1223 PRINTS P-type cation-transporting ATPase superfamily signature 880 899 - -
Lja3g1529 1223 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 517 686 IPR023299 GO:0000166
Lja3g1529 1223 Pfam Phospholipid-translocating ATPase N-terminal 44 109 IPR032631 -
Lja3g1529 1223 SUPERFAMILY HAD-like 410 924 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1529 Lja-Chr3 16544693 16551375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1529 1 1221 Primary Pumps ATPases AT1G17500 75.696 0.0 1959
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1529 K01530 - gmx:100819559 2172.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g5013 3 92317656 92324313 Lja3g1529 3 16544693 16551375 PCT