LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja3g1528	ATGTCTTCTTCTTCTTCTTCCAAAAAGCATGATGTATTCATCAGCTTTCGAGGTGAAGACACCCGAACCAATTTCACTAGCCATCTCCTTTCTGCTCTCGGTGACAACAGTATCCGAACATTCATAGATTACAAGCTTCAAAAAGGTGATGATGTTTGGCCATCACTTTCCCAAGCAATCCAGGACTCACACATTTCCATTGTTGTTTTCTCTCAAAACTATGCTTCCTCAAGGTGGTGCCTGGAAGAACTGGTCAAGATAATGGAATGCCGGAAACATCAGAGTCAGGTTGTGATACCTGTGTTCTATGAAATTGATCCATCATGTGTGCGGAACCAGACAGGGAGTTACGAGGTAGCATTTGCAAACCATGAGCAAGACCTCACTGACAATCATTCCAACCAAGACAAACTGAAACTGCGTAGGTGGAGAATTGCTCTTAGAGAAGCTGCCAATATTTCTGGATGGGACTCTCGAAGTCGAACCCTCAGGGACGACTCTCAAGCCATCCACAATATTGTCAATGATGTTTCGCAAAAGCTTTACTTCCTGAACCCTAATGAACTGAAAGGCATTGTTGGAATTGATGAAGCCTCTAAAGAACTTGAGTTATTACTCAAAAGCTTTCCAATAATTGGAATTTGGGGTATGGGTGGGATAGGTAAGACCACCATTGCTAAAGTTATGTTTGCCAAACTCTTTTCCCAGTATGACAGTGTTTGCTTCTTGGCAAATATAAGAGAAGAATCGAAAAGGATTGGACTAACATCTTTACGTGAAAAGCTTTTCTATAAGCTACTAAAAGAAGAAATTCCTGCGTCTGATGTTGTAGGATCCACATCCATTATGAGGAGGCTCAGTAGTAAACAGGTTCTCATTGTACTTGATGACGTAGATAGTTTTGAGCAATTAGAATATTTGTGTGGAGAACAGGGTGATCTGGGAGAAAATATTACCCTCATTGTAACAACAAGAGATAGAAAATACCTTATTGGAAGAGTTGATATGATATACGAGGTAAACAAAAGGAATGATGAAGAATCTCTAGAGCTTTTTTGCTTGAATGCCTTCAAAGAAAGTCATCCCCAGGAAGGATACAAAGATCTCTCAGATAGAGCAGTCCATTATGCAAAAGGCATTCAATTAGCTTTAAAAGTTTTGGGCTCACATCTGTATTCCAGAAGTCATGAATTTTGGGAAAATACATTGAGAAAACTTGAGAAGTATCCCAATGAAAAAATTTTGAATGTCTTAAAAGTTAGCTATGATGGATTAGACGATCCAACAAAGGAAATATTTCTCGACATTGCATTCTTTTTCAGAAATGAAGATAAACATGTGGCTGTTGGGATACTTGATGCTTGTGATTTTTTTGCATCTAGAGGAATAGATGTCCTAGTAGATAAAGCTCTGATAACTATTTCATATAACAACAACATACAAATGCATGATTTGCTGCAAGAGATGGGTTTGGATATAGTTCGTAAAGAATGTTCGAAAAAACCTGGAAGACGCAGCCGATTGAGGGATAATGAAGTTTATGATGTACTTAAAAATAACAGGGGGACTGATACAGTTGAAGGAATAATGTTAGACTTGTCTCAAGTAGTGGATCTGAAATTGAGTGCTGACACATTCAACAAGATGCCTAATTTAAGATTTCTTCGGTTATACGTCCCTGAGGGTAAGAAATTACGTACTGTGTACCATTGTACAATTCTTGAGGAATTTTCTGATGAATTGAGGTATTTTGAGTGGGATGGATTCCCTTTATGTTCTCTTCCACCAAATTTTTGTGCTGAGCATCTTGTTGAGATTCGCATGCCACACAGCCATGTAAAAGAGCTTTGGCAGGGGGTACAGGACCTTGTGAATTTAGAGACTATTGACCTCTGTGAATGTAAACAGTTGCTAAAGCTTCCGGATTTGTCTAAGGCGTCAAAGCTTAAACATGTGAATCTCTCCGGTTGTGAAAGCTTGCCTGATGTTCATCCCTCTGTTTTGTCTCTCAGAACACTTGAAACTTTGATTCTGGACAGGTGTGAAAAACTCAAGAGTCTTAAAAGTGAGTCGCCTTCAAAATCACTATTAAATATCAGTGTCCATGGCTGCACAGGCCTCGAGGAGTTCGCATTGTCATCTGATTTCATTGAATGTTTGGATTTAAGCAAGACAGGAAACCAAAGCTTGCACTCATCAATCGGTGGTCTAAGCAAGCTTGTGTGGCTCAATCTAGAAGGGCTGTATAATCTTCCAGATGAGTTATCGTGCCTGACATCTCTTGAGGAGCTAAGGATTTCTCACTGCGTAGAGGTTGACGAAGAGAAGCTAGGTGCCCTGTGTCCCGTCTTGCGAAACTTAGAGTTCCTATATTTGAGGGATTGTTACAATTTGTTTGGACTCCCCACCAACATCATACTCTTATCATCATTACATGAATTGAGCCTCAACAGAAGCAATATTAAGAGTTTTCCTGTAAGCATCAGCTATCTTCCAAACCTGAAGATTCTATCCTTAAATCATTGTAGGATGCTTCAGTTCATACATGGGCTTCCACCATTCATCAAAGAGCTTTCCGCCAGCAAATGTAGCTCATTGACAACGGTATCCCTTTCAAAGGATTTTTCAATAATCCAGATGGAAGCAGAGGAGAAATACACTTCACACTTGTTTGATATGAAGATTGCTGCATTGCGTAATTTATTTGTAAGATGGGGGGAGCATCTGAATTATAATGCCCACCAAAATTATAGCAGTGTTAAAATCTGTTTACCAGGAAAGAGAGTCCCGGGGCATTTTGCATATCGAACCAAACAGTCCTCCATTACCATTGAACTTCCAAACTCACGTTCTGACTTGCTAGGCCTGGTTTACTCTGTGGTTCTTAAGCCTGGTCCATCCTCGAGGATGTTGCTAGATTTTGATGGTAAACTCCATTGTCAATGCCGTTTGGGAGACGGTACAAATGTGGGAAAAGCGTCTACTTGGCCTGCACATCTCGTTTGGGGATTGGGTTCCGATCATGTTTTGGTGTGGTATGATCCATTGCATTCTCGCAGCGTTCTCCACTATAATAAACAAGTTGTTTCACTTGTTTGCTTCGAATTTTTTGTTACAACTAATACTGGCGAACCTCATGAGCTGATCAGTATCGAAGAGTGTGGAGTCCACCCACTACGCGTCTCATGGTTAGAGTTTGGCATGTTTTTGCGGGAGTCAAAGATGGAGTTGTTAGAGTGTAGATCATGTGTTCATGGAGTGTTTTTGGAGCAAAAGGTTCTGGTTCGGGTCACCTCTTGGGATTTCTTGGGATGGTGGAGCGAGGCAAGATTTTGTCTCTTGAAGATGGAGTTGAAGTTTGGATTGAGGCTTGGATTGGTGTTAGACTTGGCACAAAGATTTAGTGAAGTGGAGTGGGGATTATACCAAGCATTGGAGATGGGATTGAAGTGGACAAATCATTGA	3465	0.4055	MSSSSSSKKHDVFISFRGEDTRTNFTSHLLSALGDNSIRTFIDYKLQKGDDVWPSLSQAIQDSHISIVVFSQNYASSRWCLEELVKIMECRKHQSQVVIPVFYEIDPSCVRNQTGSYEVAFANHEQDLTDNHSNQDKLKLRRWRIALREAANISGWDSRSRTLRDDSQAIHNIVNDVSQKLYFLNPNELKGIVGIDEASKELELLLKSFPIIGIWGMGGIGKTTIAKVMFAKLFSQYDSVCFLANIREESKRIGLTSLREKLFYKLLKEEIPASDVVGSTSIMRRLSSKQVLIVLDDVDSFEQLEYLCGEQGDLGENITLIVTTRDRKYLIGRVDMIYEVNKRNDEESLELFCLNAFKESHPQEGYKDLSDRAVHYAKGIQLALKVLGSHLYSRSHEFWENTLRKLEKYPNEKILNVLKVSYDGLDDPTKEIFLDIAFFFRNEDKHVAVGILDACDFFASRGIDVLVDKALITISYNNNIQMHDLLQEMGLDIVRKECSKKPGRRSRLRDNEVYDVLKNNRGTDTVEGIMLDLSQVVDLKLSADTFNKMPNLRFLRLYVPEGKKLRTVYHCTILEEFSDELRYFEWDGFPLCSLPPNFCAEHLVEIRMPHSHVKELWQGVQDLVNLETIDLCECKQLLKLPDLSKASKLKHVNLSGCESLPDVHPSVLSLRTLETLILDRCEKLKSLKSESPSKSLLNISVHGCTGLEEFALSSDFIECLDLSKTGNQSLHSSIGGLSKLVWLNLEGLYNLPDELSCLTSLEELRISHCVEVDEEKLGALCPVLRNLEFLYLRDCYNLFGLPTNIILLSSLHELSLNRSNIKSFPVSISYLPNLKILSLNHCRMLQFIHGLPPFIKELSASKCSSLTTVSLSKDFSIIQMEAEEKYTSHLFDMKIAALRNLFVRWGEHLNYNAHQNYSSVKICLPGKRVPGHFAYRTKQSSITIELPNSRSDLLGLVYSVVLKPGPSSRMLLDFDGKLHCQCRLGDGTNVGKASTWPAHLVWGLGSDHVLVWYDPLHSRSVLHYNKQVVSLVCFEFFVTTNTGEPHELISIEECGVHPLRVSWLEFGMFLRESKMELLECRSCVHGVFLEQKVLVRVTSWDFLGWWSEARFCLLKMELKFGLRLGLVLDLAQRFSEVEWGLYQALEMGLKWTNH*	1155

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja3g1528	1154	Gene3D	Ribonuclease Inhibitor	517	713	IPR032675	-
	Lja3g1528	1154	Gene3D	-	183	334	IPR027417	-
	Lja3g1528	1154	Gene3D	-	6	182	IPR035897	-
	Lja3g1528	1154	Gene3D	Ribonuclease Inhibitor	717	901	IPR032675	-
	Lja3g1528	1154	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	7	1039	IPR044974	GO:0006952
	Lja3g1528	1154	SUPERFAMILY	Toll/Interleukin receptor TIR domain	2	156	IPR035897	-
	Lja3g1528	1154	Gene3D	-	344	426	IPR042197	-
	Lja3g1528	1154	PRINTS	Disease resistance protein signature	377	391	-	-
	Lja3g1528	1154	PRINTS	Disease resistance protein signature	285	299	-	-
	Lja3g1528	1154	PRINTS	Disease resistance protein signature	829	845	-	-
	Lja3g1528	1154	PRINTS	Disease resistance protein signature	211	226	-	-
	Lja3g1528	1154	PANTHER	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	7	1039	-	-
	Lja3g1528	1154	Pfam	TIR domain	9	182	IPR000157	GO:0007165
	Lja3g1528	1154	ProSiteProfiles	TIR domain profile.	8	181	IPR000157	GO:0007165
	Lja3g1528	1154	SUPERFAMILY	L domain-like	482	873	-	-
	Lja3g1528	1154	Pfam	NB-ARC domain	211	417	IPR002182	GO:0043531
	Lja3g1528	1154	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	181	436	IPR027417	-
	Lja3g1528	1154	SMART	till_3	9	153	IPR000157	GO:0007165
	Lja3g1528	1154	Pfam	Leucine Rich Repeat	602	621	IPR011713	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lja3g1528	Lja-Chr3	16532547	16538229	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lja3g1528	5	885	WRKY Transcription Factor Family	AT4G12020	30.795	6.32e-91	320

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja3g1528	-		-	ccaj:109795381	991.875