Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1512 ATGCAAACGGTAACGATTAGACCCGTCGACTATAAGTCAAAGGAAGGTGAAATCACATTGAGAACAATGAGCTTCGAGAAGAGAAGAAATTTTGAAGACTTGGATGAGGTTATTGCTGAAGAAACTGCATGCTCAAAGAAAAGGAAAGTGGGAAATCTGAAGCTGCAAACTACATTCTCATTCAAATATCTGCTAGAAGATAATTCTGGCTCAAAGGAGGGTGTTGTTGATTTGTTCAATGAACAAAGCTCCACAATTCTGCTTCCTAAACCAGAAATTTTGTTTTCACCAAAGTCCATTGGGGAGCTTGATGTAGCTGCAATAAAGCTGCAGAAAGTTTACAAGAGCTACCGGACTAGAAGAAATCTTGCAGATTGTGCTGTTGTTTGTGAGGAGCTATGGTGGAAAGCTTTAGACTTTGCTTCTCTTAGCCGGTGCTCTATTTCACATTTTGACTCAGTTAAATCAGAAACAGCACTTGCAAAATGGGCAAGAGCTAGAACAATGGCTGCTAAGGTGGGAAAAGGTTTGTCTAAAGATGATAAGGCTCAGAAATTAGCTCTAAGGCACTGGCTTGAAGCTATTGATCCGCGTCATCGTTATGGACACAACTTGCACTTCTACTATGATGTCTGGTTTCATAGCCAGAGTTCACAACCTTTTTTCTACTGGTTGGATGTTGGAGATGGGAAAGAAGTGAATCTTGATCAGGTGTGCGCGAGAAGTGTATTACAGAGGCAATGCATTAAGTACCTTGGAACTAAAGAAAGAGAAGCTTATGAAGTGGTTATAGAGGGAGGAAGGCTCATTTATAGAAAAAGCAAGGACCATGTACACACTGCTGAGGGATCAAAGTGGATTTTTGTTCTTAGCTCATCTAGAATTTTGTACGTTGGGGAAAAGATAAAAGGCCAATTTCAGCATTCAAGTTTTCTAGCTGGAGGTGCTACAATTTCATCTGGAAGATTGGTTGCCCAAAATGGAGTTCTTCATGCTATATGGCCCTATAGCGGTCACTACTGTCCTACAAAGAAGAATTTTATGGAATTCATTAGCTTCTTGATGGAACACAATGTGGACTTAACAAATGTTAAGAAGTATGCGGTTGATGATGATGTCCCACCTTCAAAACCGGTTGACGAGGAGCTGCAGTTTGAGTCCACAGAGGCGAATAATGCAGCTTCCAGTGACTCTGCCAAAAATAGCAGTCAAGACAATGTAGGAGGAAGGTCACAGATTAAAGAGAGAAAGCCATTGTCAAGCAAATGGACCACTGGGGTTGGTCCTAGGATTGGTTGTGTGAGAGAGTACCCAGCAAAACTCCAAGTTAAGGCACTTGAACAGCTCAATCTATCACCTAGAGTCCACCATGGAAAAGTTGCTCCCAGGACACCCATACCCTCTCCAAGGCCTAGTCCAAAAATCCACCTGTCCCCTAGGCTTGCTGTGCAAATGGGAATCACTAGCCCAAAAGTTCATGTTACCCCTGCAAATTAG 1497 0.4222 MQTVTIRPVDYKSKEGEITLRTMSFEKRRNFEDLDEVIAEETACSKKRKVGNLKLQTTFSFKYLLEDNSGSKEGVVDLFNEQSSTILLPKPEILFSPKSIGELDVAAIKLQKVYKSYRTRRNLADCAVVCEELWWKALDFASLSRCSISHFDSVKSETALAKWARARTMAAKVGKGLSKDDKAQKLALRHWLEAIDPRHRYGHNLHFYYDVWFHSQSSQPFFYWLDVGDGKEVNLDQVCARSVLQRQCIKYLGTKEREAYEVVIEGGRLIYRKSKDHVHTAEGSKWIFVLSSSRILYVGEKIKGQFQHSSFLAGGATISSGRLVAQNGVLHAIWPYSGHYCPTKKNFMEFISFLMEHNVDLTNVKKYAVDDDVPPSKPVDEELQFESTEANNAASSDSAKNSSQDNVGGRSQIKERKPLSSKWTTGVGPRIGCVREYPAKLQVKALEQLNLSPRVHHGKVAPRTPIPSPRPSPKIHLSPRLAVQMGITSPKVHVTPAN* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1512 498 MobiDBLite consensus disorder prediction 457 476 - -
Lja3g1512 498 MobiDBLite consensus disorder prediction 370 425 - -
Lja3g1512 498 PANTHER CALMODULIN-BINDING FAMILY PROTEIN 4 497 - -
Lja3g1512 498 MobiDBLite consensus disorder prediction 385 409 - -
Lja3g1512 498 MobiDBLite consensus disorder prediction 370 384 - -
Lja3g1512 498 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 4 497 IPR044159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1512 Lja-Chr3 16279682 16283110 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1512 - - ccaj:109809343 789.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1512 3 16279682 16283110 Lja3g5017 3 92365788 92377852 PCT