Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1490 ATGGACAATATTTGGATTGTGCTTGTTACAGCAATTTGTGTGTGCACTTTGATCCTCTACAGGAACAGGCTTAGACTTAAGCTCAGAACAAAACACAGAAATCAGCTTCCCTTAGGCACTCTTGGATGGCCTTTCATCGGCGAAACCATCGAGTTTGTTTCTTGTGCTTATACTGATCGCCCTGAGAGCTTCATGGACAAGAGACGCAACATGTATGGCAAGGTGTTCAAGTCACACATATTTGGGAGCCGTACAATTGTTTCCACTGATGCAGATGTGAATAAGTTCATACTGCAGAGTGATTCAAAGGCTTTTGTCCCTGCATATCCCAGGTCTCTCATGAAGCTGATGGGGGAGTCCTCTATTTTGGTCATCAATGGTAGCCTGCATAGGAGAATACATGGACTCATAGGAGCTTTCTTCAAGTCTCAGCAGCTTAAGGCTCAGATTACCAGAGATATGGAGAAATATCTCCAAGAATCAATGGCGAATTGGAGAGAGGACAATCCTGTTTACGTACAAGATGAAGCAAAAAAGATTGCCTTTGATGTACTGCTGAAGGCATTGATTAGTTTGGAACCAGGTGAAGAAATGGAGCTTCTAAGGAAACATTTTCAGGAATTTATCTCTGGTTTCATGTCTTTACCCATAAACCTACCAGGAACTAAATTATATCAATCTTTACAGGCAAAAAAGAAAATGGTGAAATTAGTGCAGAGAACTATCCAAGCTAGAAGAAAGAGTGGCATCTCCAAAGCTCCAAAAGATGTAGTGGATGTGCTTCTTAATGATGCAAATGAGAAATTGACAGATGATTTAATAGCAGATAATATTATTGATATGATGATTCCAGGGGAGGACTCAGTGCCTGTTCTCATAACTCTAGCTATAAAGTACTTATCTGAATGTCCTGCTGCTTTGCAAAGATTGACGGAGGAAAATATGAAGCTTAAGAAACTTAAAGATCAGCTTGGGGAGCCCTTATGTTGGAGTGATTACATATCATTGCCATTTACTCAAACAGTTATCACAGAAACTTTGAGAATGGGAAATATAATAATTGGTGTTATGAGAAAGGCCATAAAAGATGTTGAAATAAAAGGGTATTTTATACCACAAGGATGGTGTGTCTTTGCAAATTTGAGATCGGTTCATCTAGATGAGAAAAACTATGAGCTTCCATATCAATTCAATCCATGGAGGTGGCAAAATAAAGACATTAGCAGTTGCTATTTCACTCCTTTTGGAGGGGGACAAAGGCTGTGTCCTGGCCTTGACTTGGCCAGGCTTGAATCTTCCATCTTCCTACACCACTTTGTAACTCAATTCAGATGGTGTGCTGAAAAAGATACAATAGTGAACTTTCCCACAGTAAGAATGAAAAGGAGGATGCCTATCATGGTAAGGAGAGTGGAAACTTGA 1422 0.3987 MDNIWIVLVTAICVCTLILYRNRLRLKLRTKHRNQLPLGTLGWPFIGETIEFVSCAYTDRPESFMDKRRNMYGKVFKSHIFGSRTIVSTDADVNKFILQSDSKAFVPAYPRSLMKLMGESSILVINGSLHRRIHGLIGAFFKSQQLKAQITRDMEKYLQESMANWREDNPVYVQDEAKKIAFDVLLKALISLEPGEEMELLRKHFQEFISGFMSLPINLPGTKLYQSLQAKKKMVKLVQRTIQARRKSGISKAPKDVVDVLLNDANEKLTDDLIADNIIDMMIPGEDSVPVLITLAIKYLSECPAALQRLTEENMKLKKLKDQLGEPLCWSDYISLPFTQTVITETLRMGNIIIGVMRKAIKDVEIKGYFIPQGWCVFANLRSVHLDEKNYELPYQFNPWRWQNKDISSCYFTPFGGGQRLCPGLDLARLESSIFLHHFVTQFRWCAEKDTIVNFPTVRMKRRMPIMVRRVET* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1490 473 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 415 424 IPR017972 GO:0005506|GO:0016705
Lja3g1490 473 PANTHER CYTOCHROME P450 26 16 466 - -
Lja3g1490 473 PANTHER 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90D1 16 466 - -
Lja3g1490 473 Coils Coil 468 473 - -
Lja3g1490 473 PRINTS E-class P450 group I signature 340 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1490 473 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1490 473 PRINTS E-class P450 group I signature 412 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1490 473 PRINTS E-class P450 group I signature 380 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1490 473 PRINTS E-class P450 group I signature 422 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1490 473 SUPERFAMILY Cytochrome P450 30 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1490 473 Pfam Cytochrome P450 37 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1490 473 Gene3D Cytochrome P450 27 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1490 Lja-Chr3 15956893 15961475 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1490 32 444 Cytochrome P450 AT3G13730 68.900 0.0 611
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1490 K12638 - gmx:100797868 815.453