Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1488 ATGGAAGAAACTCCTAAGCTCCTTCATGGAACAATTGAAATTACCATCTTTAATGCCTCACCTTACTCATCTTTTTTTCCCTTCAATTGCATATTCAAAAGTGGAAAGCCTGCTTATGTGACCATCAAGGTAGACAACAAGAAGGTTGCAAAAACGAGTCAAGAAAGTGATCGTGTATGGAACCAAACCTTTCAGATTCAATGTGCTCATCCACCTGAGTCAACTATCACCATTGCACTGAAAACATCATGTTCCACATTGGGCAAATTCCACATCCAGGCCCAACAGCTGTTGAAGGAAGGAAGTTTAATCAATGGGCTCTTCCCTCTCCTCATGGAAAATGGAGAACCAAACCCAAAACTCAAGTTGAAGTTTGTATTGTGGTTCAAGCCAGCAGAATTGGAACCAAGTTGGGCAAAAGTACTCAGCTATGGGGAGTTTCAAGGGCTGAGGGATGCTGCATTCCCACAAAGGTCCAATTGTCATGTCAAACTTTATCATGATGCTCACCATTCTCCAGCTTTCCAACCTCCCTCTGATCTATGTGGGACTCCACAAAAGCTTTGGGAGGATGTCTATAAAGCCATTGAAGGTGCAGAATTTATAGTTTACATTGCAGGCTGGTCCTTGAATCCCAAGATGGTTCTGGTTAGAGATCCTCATACAGAGATTCCACATGCCAGAGGAGTAAAGCTGGGTGAGCTATTGAAGAAGAAGGCAGAGGAAGGTGTGGCTGTGAGAGTCATGCTTTGGGATGATGAAACATCTTTGCCTTTTATCAAGAACAAAGGTGTGATGAACACCCATGATGAGGATGCCTTTGCTTACTTCAACCACACAAAGGTAATATGCAGAAAATGTCCAAGATTGCACCACAAGTTCCCCACATTGTTTGCTCACCATCAGAAGATAATAACAGTGGACACCAAAGCACCCAAATCCATTGGTGACAGAGAACTCACAAGCTTTCTGGGTGGGTTAGATTTGTGTGATGGAAGATATGACACAGAGCAGCATTCACTGTTTCACACACTCATTAAGGAATCCCATTGCTATGACTTCTACCAAACAGACATTGGAGGAGCAAGCCTCAACAAAGGAGGGCCAAGAGTGCCTTGGCATGATGCTCATGCCAGTGTTACCGGTGAGGCGGCTTGGGATGTGTTAACCAATTTTGAGCAAAGATGGACAAAGCAGTGTGATCCTTCTCTTCTAGTCCCTGCTAGCACATTGGTAAATCTCATGCCTCAAACAAGCTCAAGCACTCCCAAAGAAAGGGATTGGAAAGTTCAAGTGTACAGGTCAATTGACCATGTATCTGTTGGCAAGTTGCTTGGGCAGTTAACTGTGGAGAGGAGCATCCATGAAGCTTATGTTGAGGCAATTAGGCATGCTGAGAGGTTTATATACATTGAGAACCAATATTTCATTGGGGGGTGCCATTTGTGGGAGAAAGATAGGGATTGTGGCTGCACAAATCTAATTCCCATTGAAATTGCACTGAAGGTGGTTAGCAAGATCAAAGCAAAGGAGAGGTTTGCAGTGTACATAGTCATGCCTATGTGGCCAGAAGGAGTGCCTGAAAGTGAACCTGTTCAAGATATACTTCATTGGACAAGAGAAACAATGACAATGATGTATAGGTTGATTGGAGAAGCAATACAAGGGAGTGGGGAACCAGGACACCCATCAGATTACTTGAATTTCTTCTGCCTTGCAAATAGGGAGCAGAAGGGGAAAGGGGAGTATCTTCCACCAGATTCTCCTCAACCTGGAACACAATACTGGAATGCTCAGAAAAATAGGAGATTCATGGTTTATGTTCACTCCAAGTTCATGATAGTGGACGACCTATACATGCTAATAGGATCAGCTAATGTGAACCAAAGATCCATGGATGGGGAAAGGGACACTGAGATAGCCATAGGATGCTACCAGTCTCAAGATGGAGCTGCTAACCAAATGAACCTAGGTGATATTCATGCATTCAGAATGTCACTATGGTATGAGCACACCAATAGTGCTGAGGAATTGTTCTTGGAGCCAGAAACATTGGAATGTGTGCAGAGGATGAAATCAATAGGAGATCAAATGTGGGAAATCTACAGCAGTGAAGAGGTTGTGGACATGGAGGGTGTGCACCTTGTTACTTACCCTGTGAGGGTTACACAAGAAGGGCATGTGAAGGACCTTGCCGATGGAGTTCACTTTCCTGACACAAATTGTCTAGTGAAGGGGAAGAGATCCAAAATGTTGCCCCATAACTTTACCACTTAG 2277 0.4383 MEETPKLLHGTIEITIFNASPYSSFFPFNCIFKSGKPAYVTIKVDNKKVAKTSQESDRVWNQTFQIQCAHPPESTITIALKTSCSTLGKFHIQAQQLLKEGSLINGLFPLLMENGEPNPKLKLKFVLWFKPAELEPSWAKVLSYGEFQGLRDAAFPQRSNCHVKLYHDAHHSPAFQPPSDLCGTPQKLWEDVYKAIEGAEFIVYIAGWSLNPKMVLVRDPHTEIPHARGVKLGELLKKKAEEGVAVRVMLWDDETSLPFIKNKGVMNTHDEDAFAYFNHTKVICRKCPRLHHKFPTLFAHHQKIITVDTKAPKSIGDRELTSFLGGLDLCDGRYDTEQHSLFHTLIKESHCYDFYQTDIGGASLNKGGPRVPWHDAHASVTGEAAWDVLTNFEQRWTKQCDPSLLVPASTLVNLMPQTSSSTPKERDWKVQVYRSIDHVSVGKLLGQLTVERSIHEAYVEAIRHAERFIYIENQYFIGGCHLWEKDRDCGCTNLIPIEIALKVVSKIKAKERFAVYIVMPMWPEGVPESEPVQDILHWTRETMTMMYRLIGEAIQGSGEPGHPSDYLNFFCLANREQKGKGEYLPPDSPQPGTQYWNAQKNRRFMVYVHSKFMIVDDLYMLIGSANVNQRSMDGERDTEIAIGCYQSQDGAANQMNLGDIHAFRMSLWYEHTNSAEELFLEPETLECVQRMKSIGDQMWEIYSSEEVVDMEGVHLVTYPVRVTQEGHVKDLADGVHFPDTNCLVKGKRSKMLPHNFTT* 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1488 758 CDD PLDc_pPLD_like_2 448 648 - -
Lja3g1488 758 SMART pld_4 296 333 IPR001736 GO:0003824
Lja3g1488 758 SMART pld_4 604 631 IPR001736 GO:0003824
Lja3g1488 758 Pfam C2 domain 37 110 IPR000008 -
Lja3g1488 758 SUPERFAMILY Phospholipase D/nuclease 424 688 - -
Lja3g1488 758 SUPERFAMILY Phospholipase D/nuclease 143 407 - -
Lja3g1488 758 Pfam Phospholipase D C terminal 676 747 IPR024632 -
Lja3g1488 758 Gene3D Endonuclease Chain A 174 427 - -
Lja3g1488 758 PIRSF PLD_plant 2 758 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Lja3g1488 758 Pfam Phospholipase D Active site motif 607 631 IPR001736 GO:0003824
Lja3g1488 758 Pfam Phospholipase D Active site motif 297 333 IPR001736 GO:0003824
Lja3g1488 758 PANTHER PHOSPHOLIPASE D ALPHA 4 758 - -
Lja3g1488 758 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 296 333 IPR001736 GO:0003824
Lja3g1488 758 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 604 631 IPR001736 GO:0003824
Lja3g1488 758 PANTHER PHOSPHOLIPASE D 4 758 IPR015679 -
Lja3g1488 758 Gene3D Endonuclease Chain A 447 656 - -
Lja3g1488 758 ProSiteProfiles C2 domain profile. 1 120 IPR000008 -
Lja3g1488 758 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 125 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1488 Lja-Chr3 15933282 15936567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1488 30 758 Phospholipase D Gene Family (Wang group) AT1G55180 63.243 0.0 964
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1488 K01115 - gmx:100812642 1338.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1488 3 15933282 15936567 Lja3g1488 3 15933282 15936567 ECH