Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1454 ATGGCGGAACCCGCATTGGACCCCTACGATTTCCTCCACATCGAACTCAACAAAGACGGTTCCCTCACCCGCCACGTACACCACATCGTCCCTTCCGTCCCCCCATCCCCCACCGCCATCCCCAAAATCCCCACCCTCTCCAAAGACATCCCTGTCAACTCAACCACCGGAACCTCCCTCCGCCTCTTCCTCCCCAACCCTCCACCAAACCCCACCGACCCCAAACTCCCCCTCATCATCTACTTCCACGGCGGCGGCTTCATCCTCTACCACCATTCCACCCTCATCTTCCACCAATCCTGCTCCTCCATCTCCGCCACCGTCCCCGCCATCGTCGCCTCCGTCGACTACCGCCTCTCCCCGGAGAACCGCCTCCCCGCCGCCTACGACGACGCCGTCGACACCATCAACTGGGTCCAAACCCAAGCCCTCGACCCGGAACAATCCGACCCGTGGCTCCGGGATCACGCGGACTTCACCAAATGCTTTCTCATGGGAAGCAGCTCAGGAGGAAACATCGCCTACTTCGCGGGTCTACGTGCACTCGACCTCGATCTCGCTCCTGTTAACATCGCAGGGCTGATAATGAATATTCCATTCTTCAGTGGGGCCCAGAGATCGGAATCGGAGCTCCGCCTTGTTAACGACCACATCTTGCCGTTACCGGCGAACGATCTTATGTGGGCCATGGCGTTGCCGGAGGACGCGGATCGTGACCACGTGTACTGTAATCCGACGGTTGCGGATGCGGAATTTGGGGAGAAGATCGGACGGCTGCCGAGGTGCTACGTCAGCGGGTATGGTGGGGATCCTTTGGTGGACAAGCAGAAGGAGTTTGTGAAGATTTTGGAGGCGCGTGGGGTGCACGTGGAGTCTTGTTTTGATGAGGGTGGGTATCATGCTGTGGAGCTCTTTGACAATGCAAAGGCACAGGTTTTAATTGATAATGTCAAGAATTTTATACTCTCCACTGAATAA 978 0.5736 MAEPALDPYDFLHIELNKDGSLTRHVHHIVPSVPPSPTAIPKIPTLSKDIPVNSTTGTSLRLFLPNPPPNPTDPKLPLIIYFHGGGFILYHHSTLIFHQSCSSISATVPAIVASVDYRLSPENRLPAAYDDAVDTINWVQTQALDPEQSDPWLRDHADFTKCFLMGSSSGGNIAYFAGLRALDLDLAPVNIAGLIMNIPFFSGAQRSESELRLVNDHILPLPANDLMWAMALPEDADRDHVYCNPTVADAEFGEKIGRLPRCYVSGYGGDPLVDKQKEFVKILEARGVHVESCFDEGGYHAVELFDNAKAQVLIDNVKNFILSTE* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1454 325 Pfam alpha/beta hydrolase fold 79 302 IPR013094 GO:0016787
Lja3g1454 325 PANTHER ALPHA/BETA HYDROLASE FOLD PROTEIN 5 321 - -
Lja3g1454 325 Gene3D alpha/beta hydrolase 9 324 IPR029058 -
Lja3g1454 325 PANTHER ARYLACETAMIDE DEACETYLASE 5 321 - -
Lja3g1454 325 SUPERFAMILY alpha/beta-Hydrolases 2 321 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1454 Lja-Chr3 15371900 15372877 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1454 4 245 Carbohydrate Esterase AT1G68620 38.367 5.24e-48 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1454 - - aprc:113850489 458.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1454 3 15371900 15372877 Lja3g1454 3 15371900 15372877 ECH