Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1453 ATGCCCTCACGCCCGCCGCCACCGCTTCCTTCTCCGGCGGCCACCACCCATCACCACCACCGCGAAATGATACTCGGCGGAGCCATCGCCGCCGCCGTATTCTTCATCGCACTCGTCACATCAGTAGCAATCTTCCTCTACCGGAAACTCTCCTACAACCGCACAGCACCATTCGAGCACAGCCAGCGCCGATTCTCGTACTCAGTCCTCCGCCGCGCGACAAACTCGTTTTCCCCGTCGACGAGGTTAGGCCACGGCGGGTTCGGGTCGGTTCACAAGGCGACGCTGCCGTCGGGTCAGACTGTCGCGCTGAAAGTGATGGATTCGCCTGGTTCGATCCAAGGGGAGAGGGAGTTTCACAACGAGCTCTCTCTCTGCTCCAATCTGAGGTCGCCTTTCATTCTTTCGCTTCTGGGTTTTTCGTCGGACCGGCGCGGGAGGAAGCTTGTGCTGGTGTACGAGCTCATGCCGAACCGGAGTTTGCAGGACGCGCTTCTGGACCGGCGGTGCCCGGAGCTTATGGTCTGGGTGAACCGGTTTGATGTTGCGGTTTCGGTTGCGAAGGGGTTGGAGTATCTGCATCATCACTGTGACCCGCCGGTGATTCATGGGGATATTAAGCCGAGCAACGTGCTTCTGGATCGGGAATTCAAGGCGAAGATTGGGGATTTTGGGCTTGCGAGGGTGAAGAGTACGGTGGAGGAATCTGGGATCGGGATGGTGGAGGAGAAGAAGAAGGAGGGTGTTGAGGATTGTTGCTCGGTTTTGGAGGATGTGGAGAGTGTGGCGACGAATACTACTGTTGAACGGTCGCCGGAGAGTTGTACGGTGAGGGTTTTGGATTCTGATGCTTCGCCGGAGGTGGGGGTGGTGGTGTCGCCGGAGATGGGGGTGGGGGTGGATAAATTGAGTGTTTTGTCTGATGGGTGTTTGGATAAGCTGAGTATTGATAGTGGGACTGGGAACCAGAGGAAGAAGGGTGGTGGTGGTTCTGGGAGGGATTGGTGGTGGAAGCAGGAGAGTGGGGGAGGTTCTGAATCAGGGAGGGTGAAGGACTATGTGATGGAATGGATTGGGAGTGAGATAAAGAAGGAGAGACCAAAGAGCGAGTGGGTTGATTCTGGCTCTTCTCCTTGCTCTGCAGGGAGGAATAACAGTGGCGTTGGCATTGCTGCAGTGGCGGCGGCGGTGGTGAAGAAGCAGAGGAAGAGGTTGGATTGGTGGGTATCTCTTGATGAGGAGAAGGTTAAGGCGAAGAAGAATCGGAAGCCGAGGGAATGGTGGAAGGAGGAGTTCTGTGAGGAGCTTGCCAAGAAGAGCAGGAAGAAAAAGAGGAGTCTTGATTCCAGTGGCGAATCTTGGTGGCAGAGAGACATTGAGGATGGTGCAGCCAAGAAGAAGAAGAAGAGGAAGAGTAAAGGTAGTAGAGGGAGTATAGATTGGTGGTTGGAGGGTTTGAGTGGTGAGATTAGGAATCTGGGAAGGAGGAATAGCCAGGATTGGGTAAGTGGAGATATCCCCAAGAGTGGTGGAATTAGCAGCACACCAAGTATGAGGGGAACTGTTTGTTACATTGCCCCTGAGTATGGTGGTGGTGGACAACTATCTGAGAAGTGTGATGTGTATAGTTTTGGTGTTTTGCTCCTGGTTTTGATTGCTGGAAGGAGGCCACTTCAGGTGACGGCATCCCCTATTTCCGAATTTGAGAGAGCTAATCTCATTTCTTGGGCTAGGCAACTTGCTCACAATGGGAGGCTATTGGATCTTGTTGACACTTCCATTCATTCATTGGACAAGGAGCAGGCACTGCTCTGCATCACCATTGCCTTGTTGTGCCTGCAGAGATCGCCGGCGAAGAGGCCTTCCATGAAAGAGATTGTGGGGATGCTTACCGGTGAGGCTGAGCCGCCTCACTTGCCCTTCGAGTTCTCGCCATCACCACCGTCTAATTTCCCCTTCAAGTCCCGGAAGAAGGCTCGGTGA 1983 0.5421 MPSRPPPPLPSPAATTHHHHREMILGGAIAAAVFFIALVTSVAIFLYRKLSYNRTAPFEHSQRRFSYSVLRRATNSFSPSTRLGHGGFGSVHKATLPSGQTVALKVMDSPGSIQGEREFHNELSLCSNLRSPFILSLLGFSSDRRGRKLVLVYELMPNRSLQDALLDRRCPELMVWVNRFDVAVSVAKGLEYLHHHCDPPVIHGDIKPSNVLLDREFKAKIGDFGLARVKSTVEESGIGMVEEKKKEGVEDCCSVLEDVESVATNTTVERSPESCTVRVLDSDASPEVGVVVSPEMGVGVDKLSVLSDGCLDKLSIDSGTGNQRKKGGGGSGRDWWWKQESGGGSESGRVKDYVMEWIGSEIKKERPKSEWVDSGSSPCSAGRNNSGVGIAAVAAAVVKKQRKRLDWWVSLDEEKVKAKKNRKPREWWKEEFCEELAKKSRKKKRSLDSSGESWWQRDIEDGAAKKKKKRKSKGSRGSIDWWLEGLSGEIRNLGRRNSQDWVSGDIPKSGGISSTPSMRGTVCYIAPEYGGGGQLSEKCDVYSFGVLLLVLIAGRRPLQVTASPISEFERANLISWARQLAHNGRLLDLVDTSIHSLDKEQALLCITIALLCLQRSPAKRPSMKEIVGMLTGEAEPPHLPFEFSPSPPSNFPFKSRKKAR* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1453 660 Gene3D Phosphorylase Kinase; domain 1 40 155 - -
Lja3g1453 660 ProSitePatterns Protein kinases ATP-binding region signature. 83 105 IPR017441 GO:0005524
Lja3g1453 660 Pfam Protein kinase domain 515 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g1453 660 Pfam Protein kinase domain 80 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g1453 660 MobiDBLite consensus disorder prediction 317 347 - -
Lja3g1453 660 SMART serkin_6 77 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g1453 660 PANTHER OS07G0586332 PROTEIN 1 660 IPR044576 -
Lja3g1453 660 Gene3D Transferase(Phosphotransferase) domain 1 156 273 - -
Lja3g1453 660 Gene3D Transferase(Phosphotransferase) domain 1 495 636 - -
Lja3g1453 660 SUPERFAMILY Protein kinase-like (PK-like) 51 649 IPR011009 -
Lja3g1453 660 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Lja3g1453 660 ProSiteProfiles Protein kinase domain profile. 77 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g1453 660 MobiDBLite consensus disorder prediction 638 660 - -
Lja3g1453 660 PANTHER OS07G0586332 PROTEIN 1 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1453 Lja-Chr3 15357628 15359849 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1453 508 631 Receptor kinase-like Gene Family AT3G58690 36.154 6.30e-14 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Lja3g1453 Pkinase 1.8e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1453 - - gmx:100814933 912.524
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1453 3 15357628 15359849 Lja3g1453 3 15357628 15359849 ECH