Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1441 ATGGAAGCTAAGCCTCTCCAAGTTGTTCCCTCTCCACACAACAACTCAGGGGTAGGAGATGGACCCCAGATGAAGATTGAGGATGGTGTAGTTGATGAAGGGAAGAAGGGTGTTGTGGTGAAGGGAGAAAACTCATCCTCCAGTGTTGAACATGATCTTGGGGTTAGTGCTTGCTCTGCAGTAAACACAGAACGCCATCAAAAGTGTTGTCTATTCTCAGATTTTCAGAGGCGTGAGCTTGACCACCAAGTTTTCATCTTCAACCGCTTTGCCAGTAACCTTCCTCTTCCTCACCACATGCTGCAATTTCCAAGCCACATGTCAGAGAACCTGGGTTTTGATTATGGGACTATGGTGGATGATCCAGAACCGCATAGGTGTAGAAGAACTGATGGAAGGAAATGGAGGTGCGGTAAGAACACAGTGCCTGATCAGAAGTACTGTGAACGCCACATGCATAGAGGTCGTAATCGTTCAAGAAAGCCTGTGGAAAAATCATCTGAAGTTAACTCTTCTTTGACAACAAAGCCTTGTGGCAACATGTCTCATGCCAAACCAGCCCCAAGCACAGAATCTGCAGTTTCAAGTCCAAACAATGTGACCATTCATGAACCACCTTCCACCCAATCAAGTATTGTCAATACCTCTTCTCTTAACAGCCGGTCGAGAAATGTCACCGGTTCTGCTGATTATCAAAGCCCCCTTTCTCCTGCTGTTGCACCGAAGTTGACCACTTTCAGCAGCATGGCATCTGTTACTCCACATAACAGAAGTCACCTTAATGTGCACAACAAGAAAGATGAGCAGAACAGCAGTTGTATCAGCAACAAGATCAGTATTTACAGTAGTGGGAAAGGAAGCATTGTGTGTGATAGTAATGGTATCTCTACTGGAATTGGCTTCTCCCCAAGGAGTGTTCTTCAAGTGTCTGGTTGCAATCATGCGTACCTCAACTACAGAAACAACGTCGAATCTGAAGCTGGTAGGTGCCGGAGAACAGACGGTAAGAAGTGGCGGTGCAAGGGTTGTGTTCTTCCCGGTCAGAAGTATTGCGCTACGCACGTGAACAGAGGAGCTAAAAAGCGTGTTACAAGCCATGAACCAGCAGCTACTACTACTTCCACTACTTACCCTTCAGCCACAACCAACAACATTCAGAAAGCCCAAATTACAAATCTTTCAATGTCAGTTCCTGCAGCAAGTGCAGCAGCAGCAGCATTCACAGAGTGTAATGTGAAAAGTGCTAGTAGCAATGACACTGATATCACCATCAGTGACACCATAAATGAATGTAACAACTATCTTTCATCCTAA 1314 0.4551 MEAKPLQVVPSPHNNSGVGDGPQMKIEDGVVDEGKKGVVVKGENSSSSVEHDLGVSACSAVNTERHQKCCLFSDFQRRELDHQVFIFNRFASNLPLPHHMLQFPSHMSENLGFDYGTMVDDPEPHRCRRTDGRKWRCGKNTVPDQKYCERHMHRGRNRSRKPVEKSSEVNSSLTTKPCGNMSHAKPAPSTESAVSSPNNVTIHEPPSTQSSIVNTSSLNSRSRNVTGSADYQSPLSPAVAPKLTTFSSMASVTPHNRSHLNVHNKKDEQNSSCISNKISIYSSGKGSIVCDSNGISTGIGFSPRSVLQVSGCNHAYLNYRNNVESEAGRCRRTDGKKWRCKGCVLPGQKYCATHVNRGAKKRVTSHEPAATTTSTTYPSATTNNIQKAQITNLSMSVPAASAAAAAFTECNVKSASSNDTDITISDTINECNNYLSS* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1441 437 ProSiteProfiles WRC domain profile. 121 165 IPR014977 -
Lja3g1441 437 MobiDBLite consensus disorder prediction 166 236 - -
Lja3g1441 437 ProSiteProfiles QLQ domain profile. 71 106 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lja3g1441 437 PANTHER - 307 399 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lja3g1441 437 PANTHER GROWTH-REGULATING FACTOR 9 307 399 - -
Lja3g1441 437 ProSiteProfiles WRC domain profile. 324 368 IPR014977 -
Lja3g1441 437 Pfam WRC 122 164 IPR014977 -
Lja3g1441 437 Pfam WRC 326 366 IPR014977 -
Lja3g1441 437 PANTHER - 36 257 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lja3g1441 437 MobiDBLite consensus disorder prediction 148 236 - -
Lja3g1441 437 MobiDBLite consensus disorder prediction 1 23 - -
Lja3g1441 437 PANTHER GROWTH-REGULATING FACTOR 9 36 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1441 Lja-Chr3 15193287 15196361 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1441 76 401 GRF Transcription Factor Family AT2G45480 31.467 6.52e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1441 - - gmx:100795050 438.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1441 3 15193287 15196361 Lja3g1441 3 15193287 15196361 ECH