Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1423 ATGGATTGTGGAAGTAGTGTTGAGCGAGGTGGGCCTTGTGGTGCGTGCAAGTTTCTTCGGAGAAAGTGTGTGAAGGGATGCATATTTGCACCTTACTTTGACTCCGAGCAAGGAACGGCTCATTTTGCGGCGGTTCACAAGGTGTTTGGTGCTAGCAATGCCTCTAAGTTACTCATGAAGATCCCTGCTCACAAGCGTCTTGATGCTGTTGTTACTCTCTGCTATGAGGCACTTGCTAGGGTTAGAGACCCAGTTTATGGCTGTGTTGGCCACATCTTTTTTCTTCAACAACAGGTCATGAACTTGCAGGCAGAGTTAACCTATGTTCAAGCACGTCTGGCAACAATGCAGCCCCTCCCAATCCCAGTAGCTCCTTCTCTTCAAAACCCTCAATCCTCTTCGCCAACAAGCTTTCATTCCTCCTCAGATCACTTGGCAACAAATGTTGACTTGCAAAGTGCCTCTAACATGTATATGCACTTTGACCCTCTACAGCCACATTCAACATCATTAGAGTTGAGCAACTTTTTCAACACATCAGATCAACAACTTGAGGATGGGGAGCTCCAAGCTTTGGCTCGAGAATTTGTGTCTAGGTACTTGCCTGGAGTAAGATTCCAGCCATCTGATTCTCACTAA 639 0.4648 MDCGSSVERGGPCGACKFLRRKCVKGCIFAPYFDSEQGTAHFAAVHKVFGASNASKLLMKIPAHKRLDAVVTLCYEALARVRDPVYGCVGHIFFLQQQVMNLQAELTYVQARLATMQPLPIPVAPSLQNPQSSSPTSFHSSSDHLATNVDLQSASNMYMHFDPLQPHSTSLELSNFFNTSDQQLEDGELQALAREFVSRYLPGVRFQPSDSH* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1423 212 PANTHER LOB DOMAIN-CONTAINING PROTEIN 19 8 202 - -
Lja3g1423 212 ProSiteProfiles LOB domain profile. 11 113 IPR004883 -
Lja3g1423 212 Pfam Lateral organ boundaries (LOB) domain 12 110 IPR004883 -
Lja3g1423 212 PANTHER LOB DOMAIN CONTAINING PROTEIN 8 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1423 Lja-Chr3 15061345 15065409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1423 4 209 AS2 family AT4G00210 56.951 3.12e-79 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lja3g1423 LOB 2.9e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1423 - - gmx:100791377 332.028