Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1383 ATGGCACAAGCACAACTCAACCTCATATCAATTGCCATTTTGTTTTCTCTCATAGTTTCAAGTCTTGCCCGAGTTGAGCCATCCTTGTCCAGGAACAACAATTCCCAAACAAAAACCTACATAGAGTCGTCTTGCGAGCGAACCCTCTATCCTGAGAGCTGCGTTCGTTACCTTTCCAAATTTGGCACCGATTCGAACTCCACCACAGGTGGTCCTCAGCGCTTAGCGCACATTGCCTTGTCAGTTAGTCTTACCAGAGCAGTGCACACAAGAGGGTACTTGTTGGAAGTGGCCAAGGAACTTGAGAACAAAAAGGTGTACTTAACCGTGCAAGATTGTGTGAATCAAATCAATGATAGTGTCGACGAACTCAGCCAAGCCATCCGAGAACTACGCCGGTTGAATAAGTTTGGCTCCACCATCAATGATAAAATGTTGTGGCATATAAGCAACGTTGAGACATGGGTTAGCACTGCCTTAACAGATGCTAGCAGTTGTGTGCGTTCGTTCCCGGGTCATAGGATGAGCAAGAAGGTAGCTTCAATTAAGGTTAAGGCCAAGAATGTTGCAGAAGTCACTAGCAATGCACTAGCTTTGTTCCATAGATATGCTTCCAGTTACCGCCAAGCAGCTGCAGCTAGAACAAACAAGAAGCCTTGA 660 0.4591 MAQAQLNLISIAILFSLIVSSLARVEPSLSRNNNSQTKTYIESSCERTLYPESCVRYLSKFGTDSNSTTGGPQRLAHIALSVSLTRAVHTRGYLLEVAKELENKKVYLTVQDCVNQINDSVDELSQAIRELRRLNKFGSTINDKMLWHISNVETWVSTALTDASSCVRSFPGHRMSKKVASIKVKAKNVAEVTSNALALFHRYASSYRQAAAARTNKKP* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1383 219 Pfam Plant invertase/pectin methylesterase inhibitor 40 199 IPR006501 GO:0004857
Lja3g1383 219 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 203 IPR035513 -
Lja3g1383 219 SMART PMEI_2 36 199 IPR006501 GO:0004857
Lja3g1383 219 CDD PMEI-like_3 43 205 - -
Lja3g1383 219 PANTHER BNAANNG18590D PROTEIN 4 207 - -
Lja3g1383 219 Coils Coil 114 134 - -
Lja3g1383 219 PANTHER PECTINESTERASE INHIBITOR-LIKE 4 207 - -
Lja3g1383 219 TIGRFAM PME_inhib: pectinesterase inhibitor domain 10 203 IPR006501 GO:0004857
Lja3g1383 219 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 203 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1383 Lja-Chr3 14640390 14641049 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1383 6 200 Carbohydrate Esterase AT3G49220 26.866 3.34e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1383 - - gmx:100791798 274.633