Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1382 ATGGCACAACACAACCTCTCATCACTTGCCATTTTCTTTTTTCTCCTTTTTTCAAGTCTTGCCAAAGTTGAGTCATCCTTGGCAAGGAGCAATTCCAAATCAAAGACCGACATAGAGTCATCTTGCGAGGGCACCCTCTACCCTGAGATTTGCATTCGTTACCTTTCCAAATTCGGCACCAATCCAAATTCCACCACAGGTGGTCCTCAACGCTTAGCGCATATTGCCTTGTCAGTGAGTCTTGCTAGAGCAGTGCACACAAGAGGGTACTTGTTGGAAATGGCCAAGGAACTCAAGGAAATCGAGAACAAAAAGGTGTACCTAACCGTGCAAGATTGTGTGAATCAAATCAACGATAGCGTGGACCAGCTTAGCCAAGCCATCCGAGAACTACGCCGGTTGGACAAGTTTGGCTCCGCCATCAATGATAAAATGTTGTGGCACATTAGCAACGTTGAGACATGGGTGAGCACAGCCTTGACAGATGCTAGCAGTTGTGTGCAGTCTTTCCCAGGTCATAGGATGAGCAAGAAGATAGCTTCAATTAAGGTTAAGGCCAAGAATGTAGCAGAAGTCACTAGCAATGCACTAGCTTTATTCCATAGATACGCAACTGCGTACCGCCAAGCAGCTGCAGCTAGAACTACCAAGAAGCCATGA 660 0.4636 MAQHNLSSLAIFFFLLFSSLAKVESSLARSNSKSKTDIESSCEGTLYPEICIRYLSKFGTNPNSTTGGPQRLAHIALSVSLARAVHTRGYLLEMAKELKEIENKKVYLTVQDCVNQINDSVDQLSQAIRELRRLDKFGSAINDKMLWHISNVETWVSTALTDASSCVQSFPGHRMSKKIASIKVKAKNVAEVTSNALALFHRYATAYRQAAAARTTKKP* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1382 219 Pfam Plant invertase/pectin methylesterase inhibitor 38 199 IPR006501 GO:0004857
Lja3g1382 219 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 203 IPR035513 -
Lja3g1382 219 PANTHER BNAANNG18590D PROTEIN 2 207 - -
Lja3g1382 219 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 203 IPR006501 GO:0004857
Lja3g1382 219 Coils Coil 114 134 - -
Lja3g1382 219 PANTHER PECTINESTERASE INHIBITOR-LIKE 2 207 - -
Lja3g1382 219 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 202 IPR035513 -
Lja3g1382 219 SMART PMEI_2 33 199 IPR006501 GO:0004857
Lja3g1382 219 CDD PMEI-like_3 40 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1382 Lja-Chr3 14636057 14636716 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1382 9 200 Carbohydrate Esterase AT5G53370 24.519 2.48e-10 57.8