Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1371 ATGAGAAATGTTGTTCTGTTCTCCCTTCTTTGCTGGCTGCTATGTTCCCAACTGTGTTCAGGGGGAGGAGACACGTTAAACCTTGGCAAGATGATAACTCAGGACTCGGAGAACAACCTTGTTTCAGAAGGAAATGAATTTGAATTAGGCTTCTTTTCCTTGCCCATTGGAAGTGAAAAAAAGTACTTGGGGATATGGTATCACAACTTGGAACCACAAACAGTGGTGTGGGTTGCCAACAGAGACAACCCTGTTAAAGGTTCTAATGGAGTTTTCCAAATTGCAGAGGATGGAAATCTCGTGGTAGAAGATGCATCAGAACAAGTTTGGTCCTCAGCACTTGAAGGGTCTTCATCCAAAAACAGAACACTGAAGCTCCTTGACTCTGGGAATTTAGTACTAATGGATGATGATTCGGGAATGAGGAGATACCTGTGGCAAAGCTTCCAACACCCAACACACACGTTTCTTCGGGGGATGAAAATGGATGCAAATTTAACATTAACTTCTTGGCGAAACGACAACGACCCCGGAAGTGGGAGCTTCACCTTCAAGCTGCTTCAGAAAGGTAGCTGCATAGTGAATAACCAGTCACAACTTTACTGGGTGCTTCGGACTGATAGTGATAGACTCAGTTCACAAGAGATATCCCCCCTCGTGCTTACCTTGTTAGGCTTGGGAGTAAATGCCACATCCACATCCGGTAATTCATCGTCCAGGTTTCGAGAAGTTTTTGATTTTCACAAGTCAAGGTTGATAATGAATCATACTGGGCAGGTGCAGTTTCTAAAGTGGGAAAATGAAGATACAGAATGGTTTTTGCTATGGTCGGGACCAGGTGACAAGTGCGACACACATAACTACTGTGGAAGCTTTAGCAGCTGCGACAAGAGTAAATGGAAGCCCTGTAAATGTTTACCAGGATTCACTCCCAGGTTGCCTTATGATCAGTACCTTGGAGGGAGGCAAGGGTGTGTCAGAAAATCAAAGACTTGTAGTAGTAAAGGCATGATGTTCCTCAACTTAAAGAGGTTAAAAGTGGGATACCCAGATGAAGCTTTCCCAACAGAAACAGAAGCTGAGTGCCGGTCTCAATGCCTTAAAATGTGTCCCCACTCCCAGTGCCAAGCTTATTCATATAATTCATATAATAGGTCTAATTATGATCGTAGTTCATTTTCATGTTGGATCTGGACAAGGGATTTACTTACACTTGAAGAGCAGCAAGATAGTGGTGGTGATCTTTCTATCCTGATCAGGAGATCAGACATAGCATCAACTGCAAAATCGTGTGCCCCTTGTGGCACATATGTGATTCCTTATCCTCTAAGTACTGGGCCAAACTGTGGAGACCCAATGTACAGCAAGTTCAATTGTGACTACACGAAAGGCCAGGTTAGCTTCATGATGTCTGGCGGAAAATCATACCGAGTTACTTGGATAGATGAAGGTGCCAGAAAGTTTTACATCCAAACGAATGATTCAGATTCAGACCACTGTGATTCAAGTTCCAGCTATCAAAGTTACAAGCCTAGTTCTCCATTTAATGTCACTAACTGGTGCTTTAGTAAAGATGAAATAGAGGTCACTTGGCTACCAGCACCACAACCTACCTGTAATAAGTCCAGAGACTGCAACCATTGGCTCCATTCAACATGCACTCCTTCAAACACTGAAGGAGTAAGGAGGTGCCTTTGCAATTCAAATTACCTGTGGAATACCTCAAGTTATAGTTGTATACAAGAATCATCAAGCCATTCAACCAACCGATTGCCATTGATTCTCACAGCAATTCTTGTGGGCACAATTATCCTGGCATGTGCCATAGGGTTTGCTTATGTTCGAAGGAAGAAAATAGCCCAGAAGCTTGATAAGGTAAACATCCAAGTTCAAGAGAGCTTGTACGGCAGTGAAAGACATGTGAAAGGTTTGATAGGACTAGGAAGTCTAGAAGAAAACAACAGTGAAGGCATTGAAGTACCCTATTACACTTTTAGAAGCATTCTAGCAGCTACAGAAAATTTCTCAGAATCGAACAAGCTTGGAAGAGGAGGATATGGGCCTGTGTATAAGGGAAGGTTTCCTGGAGGTCAAGACATTGCTGTAAAGAGGCTATCAGCTGTTTCTACTCAAGGCTTAAAGGAATTCAAAAATGAGGTTGTTTTGATTGCCAAACTTCAACATCGGAATCTTGTTAGGCTTAGGGGTTATTGCATGAAAGGAGAAGAGAAAATCCTACTTTATGAGTACATGCCAAATAAGAGCTTGGACTCATTTATATTTGATCGGACGCGAACTTTGCTCCTGAATTGGCAAATGCGGTTCGACATAATCCTAGGCATTGCACGAGGGCTGCTCTATCTTCACCAAGACTCCAGATTGAGAGTGATCCACAGAGACCTGAAAACCAGCAACATTCTTCTAGATGAGGAGATGAATCCAAAGATATCAGATTTTGGCCTTGCTAAAATATTTGGGGGAAAAGAGACTGAAGCAAGCACAGAAAAAGTAGTGGGGACCTTTGGATATATGGCTCCAGAGTATGCATTGGACGGATTTTTTTCAGTGAAATCAGATGTTTTCAGCTTTGGGGTAGTCCTACTAGAGATTCTCAGCGGAAAAAGGAACACGGGATTTTATGAGTGCAAACAAATTTCTAGCCTTTTGGGTTATGCATGGAGATTATGGACAGAGAATAAGCTTCTAGACTTAATGGACCAATCTATTGGTGAAAGTTGCAATGAAAATCAATTCATGAAGTGTGCACTAATTGGACTCTTATGTGTACAAGATGAACCGGGTGATCGGCCTACAATGTCAAATGTTGTGACCATGCTTGATAGTGAGACTGCAACCATTCCAATTCCAACGCAGCCAACCTTTTTCGCGAGAAAGCCTCCATCGATCAGCGATTCTGGTTCTTCCAGCAAACAAGAAATAATAAGTCTAGAATTTGATAGCAGTTATCAACATGGTAGATAG 2982 0.4235 MRNVVLFSLLCWLLCSQLCSGGGDTLNLGKMITQDSENNLVSEGNEFELGFFSLPIGSEKKYLGIWYHNLEPQTVVWVANRDNPVKGSNGVFQIAEDGNLVVEDASEQVWSSALEGSSSKNRTLKLLDSGNLVLMDDDSGMRRYLWQSFQHPTHTFLRGMKMDANLTLTSWRNDNDPGSGSFTFKLLQKGSCIVNNQSQLYWVLRTDSDRLSSQEISPLVLTLLGLGVNATSTSGNSSSRFREVFDFHKSRLIMNHTGQVQFLKWENEDTEWFLLWSGPGDKCDTHNYCGSFSSCDKSKWKPCKCLPGFTPRLPYDQYLGGRQGCVRKSKTCSSKGMMFLNLKRLKVGYPDEAFPTETEAECRSQCLKMCPHSQCQAYSYNSYNRSNYDRSSFSCWIWTRDLLTLEEQQDSGGDLSILIRRSDIASTAKSCAPCGTYVIPYPLSTGPNCGDPMYSKFNCDYTKGQVSFMMSGGKSYRVTWIDEGARKFYIQTNDSDSDHCDSSSSYQSYKPSSPFNVTNWCFSKDEIEVTWLPAPQPTCNKSRDCNHWLHSTCTPSNTEGVRRCLCNSNYLWNTSSYSCIQESSSHSTNRLPLILTAILVGTIILACAIGFAYVRRKKIAQKLDKVNIQVQESLYGSERHVKGLIGLGSLEENNSEGIEVPYYTFRSILAATENFSESNKLGRGGYGPVYKGRFPGGQDIAVKRLSAVSTQGLKEFKNEVVLIAKLQHRNLVRLRGYCMKGEEKILLYEYMPNKSLDSFIFDRTRTLLLNWQMRFDIILGIARGLLYLHQDSRLRVIHRDLKTSNILLDEEMNPKISDFGLAKIFGGKETEASTEKVVGTFGYMAPEYALDGFFSVKSDVFSFGVVLLEILSGKRNTGFYECKQISSLLGYAWRLWTENKLLDLMDQSIGESCNENQFMKCALIGLLCVQDEPGDRPTMSNVVTMLDSETATIPIPTQPTFFARKPPSISDSGSSSKQEIISLEFDSSYQHGR* 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1371 993 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 177 IPR036426 -
Lja3g1371 993 ProSiteProfiles PAN/Apple domain profile. 332 422 IPR003609 -
Lja3g1371 993 Gene3D - 19 151 IPR036426 -
Lja3g1371 993 MobiDBLite consensus disorder prediction 963 993 - -
Lja3g1371 993 Pfam PAN-like domain 332 403 IPR003609 -
Lja3g1371 993 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 15 991 - -
Lja3g1371 993 Pfam D-mannose binding lectin 74 167 IPR001480 -
Lja3g1371 993 Gene3D Phosphorylase Kinase; domain 1 649 750 - -
Lja3g1371 993 ProSiteProfiles Protein kinase domain profile. 675 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g1371 993 CDD B_lectin 36 152 IPR001480 -
Lja3g1371 993 CDD STKc_IRAK 681 947 - -
Lja3g1371 993 SMART ntp_6 334 419 IPR003609 -
Lja3g1371 993 Pfam Protein tyrosine and serine/threonine kinase 678 946 IPR001245 GO:0004672|GO:0006468
Lja3g1371 993 SUPERFAMILY Protein kinase-like (PK-like) 657 971 IPR011009 -
Lja3g1371 993 ProSitePatterns Serine/Threonine protein kinases active-site signature. 796 808 IPR008271 GO:0004672|GO:0006468
Lja3g1371 993 SMART blect_4 31 152 IPR001480 -
Lja3g1371 993 SMART serkin_6 675 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g1371 993 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 15 991 - -
Lja3g1371 993 Pfam S-locus glycoprotein domain 232 312 IPR000858 GO:0048544
Lja3g1371 993 ProSiteProfiles Bulb-type lectin domain profile. 25 147 IPR001480 -
Lja3g1371 993 Gene3D Transferase(Phosphotransferase) domain 1 751 954 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1371 Lja-Chr3 14329378 14335194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1371 665 987 Receptor kinase-like Gene Family AT4G23140 56.156 2.10e-125 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lja3g1371 PK_Tyr_Ser-Thr 1.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1371 - - gmx:100807185 1214.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1371 3 14329378 14335194 Lja3g1371 3 14329378 14335194 ECH
Lja3g1371 3 14329378 14335194 Lja3g1371 3 14329378 14335194 PCT