Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1365 ATGAGGAACCAATGTTTCTGGCTTTCTCTTCTCATTCTTTTCTTCTCTTTCTTAAACCCTCCTCCTTCCCTTGCAGCTCTAACCACCATCTCAGGAAACCAATCTCTCTCTGGGGACCAGACCCTTGTCTCCAAAGGTGGAACATTTGAACTGGGTTTCTTCAAACCAGGTAACAATTCCTCTAACTACTACATAGGCATGTGGTACAAAAAGGTTTCTCAGCCAACGTTTGTCTGGGTAGCCAACAGAGACCACCCCATCTCTGACAAAAAAACTGCCAAGTTAACAATTTCTGGTGGTAATCTAGTTCTCTTTGATGGCTCTTCAAATCAAGTTTGGTCAACAAACATTACCAACAACTCAGGTTCTGTTGTGGCTGTTCTTCTAGATTCTGGAAACCTTGTTCTAAGAGACAGGGTTGATGCACCAGAATCAGATACTCCTCTGTGGCAGAGTTTTGATCATCCAACAGATACATGGCTTCCAGGTGGAAAAATCAAGCTTGACAACAAAACAAAGAAGCCTCAGTATTTGACATCATGGAAGAATACAGAGGATCCTGCAACGGGTTTGTTCTCTCTGGAATTGGACCCTAAAGGGACTAATTCTTATTTGATTCTTTGGAACAAGTCTGAAGAGTATTGGACTAGTGGCCCTTGGAATGGAAGAATTTTCAGTTTGGTTCCTGAGATGAGGGCGAACTATATCTATAATTTCACTTTTGTGGCGAATGAGAATGAGAGTTACTTCACATACTCATTGTATAATCCTTCCATTATATCAAGGTTTGTGATGGATATTTCAGGGCAGATTAAGCAGCTATCTTGGTTGGAGAATATCAAGCAATGGAACTTGTTTTGGTCACAGCCAAGAAGACAGTGTGATGTTTATGCTTTTTGTGGAGCATTTGGGAGCTGTACTGAAAATTCAATGCCTTATTGTAGCTGTTTGACTGGTTTTGGGCCAAAATCACAGTCTGATTGGGATCTGGAGGATCATTCAGGTGGGTGTCAGAGGAAAACCAAGTTGCAATGTGAGGATTCTAATGCTTCTAAGGGGAATAAGGATAAAGATAAGTTTCTTGCAATCCCCAACATGGCATTGCCTAAACATGCACAATCTGTAGGATCAGGGAATATTGAGGAGTGTGAATCAACCTGCTTCAACAACTGCTCTTGCAGTGCTTATGCATATGACAGTAATGGATGTTCAATTTGGATTGGAGAACTTCTGAATCTGCAGCAGCTATCTTCAGATGATAGTAGTAGAGAAACTTTGTATCTCAAACTCGCAGCGTCCGAGTTTGATGATGCTAAAAGCAACAAGGGGGTGATTATTGGTGTTGTTGTGGGTGTGGTTGTGGGGATAGGGGTTTTACTGGCCCTTATTTTGTTTTTCATGGTTAGGAGAAGGAGGAGAATGGTTGGAACTGGAAAACCTGTGGAGGGTTCTTTGGTGGCATTTGGGTATAGAGATTTGCAAAATGCTACTAAGAATTTCTCTGAGAAATTGGGAGGAGGAGGGTTTGGTTATGTTTTCAAAGGAACATTAGCTGATTCGAGTTTCGTAGCAGTGAAAAGGCTGGAGAGTATTAGCCAAGGAGAGAAGCAGTTCCGATCAGAAGTGAGCACAATTGGGACAGTACAGCATGTTAATCTCGTTCGGCTCCGCGGTTTCTGCTCAGAAGGTGCCAAAAAGCTTCTGGTTTATGATTACATGCCAAATGGCTCCTTGGATTTTCATCTGTTCAAGAACCAGAACTCTGAGGTGTTGGATTGGAAAGTGAGGTACCAAATTGCCCTGGGAACTGCAAGGGGGTTAACTTATCTCCATGAGAAGTGCAGAGATTGTATCATACATTGTGATGTGAAGCCTGAAAACATTCTCTTAGATGCTGATTTTTGTCCGAAAGTTGCGGATTTTGGGCTTGCAAAGCTAGTTGGAAGAGAGTTCAGCAGGGTCCTCACAACAATGAGAGGAACTAGGGGCTATCTTGCTCCAGAGTGGATTTCTGGGGTGGCTGTCACGGCGAAAGCCGATGTGTACAGCTATGGAATGATGCTTTTTGAGTTTGTATCAGGGAGGAGGAACTCTGATCCATCTGAAGATGGCCAAGTTAAGTTCTTTCCTACCTTTGCTGCAAATGTGGTTATCCAAGGTGGAAATGTTCTTAGCCTGTTGGACCCTAGGTTGGAGGGAAATGCTGACATTGAAGAGGTTACTAAAGTGATCAAAGTTGCATCATGGTGTGTTCAAGATAGTGAATCTTTCAGACCAAGCATGGGTCAGGTGGTTCAAATTCTTGAGGGGATCATGGATGTGAATGTGCCTCCACTTCCAAGATCCCTTCAAGTGTTTGAGGAAAACCCAGAGAAGTTGGTTTTCTTCACAGACTCTAGCTCTAACCAGAGTTCACAGGTTAGGAGCAATGTCTCAGGTACCTCCTCTCAGGTCAAAAGTAGCATCTCATCAGCAAGCAACAAGTCCATGGAAGAAAATTAA 2502 0.4289 MRNQCFWLSLLILFFSFLNPPPSLAALTTISGNQSLSGDQTLVSKGGTFELGFFKPGNNSSNYYIGMWYKKVSQPTFVWVANRDHPISDKKTAKLTISGGNLVLFDGSSNQVWSTNITNNSGSVVAVLLDSGNLVLRDRVDAPESDTPLWQSFDHPTDTWLPGGKIKLDNKTKKPQYLTSWKNTEDPATGLFSLELDPKGTNSYLILWNKSEEYWTSGPWNGRIFSLVPEMRANYIYNFTFVANENESYFTYSLYNPSIISRFVMDISGQIKQLSWLENIKQWNLFWSQPRRQCDVYAFCGAFGSCTENSMPYCSCLTGFGPKSQSDWDLEDHSGGCQRKTKLQCEDSNASKGNKDKDKFLAIPNMALPKHAQSVGSGNIEECESTCFNNCSCSAYAYDSNGCSIWIGELLNLQQLSSDDSSRETLYLKLAASEFDDAKSNKGVIIGVVVGVVVGIGVLLALILFFMVRRRRRMVGTGKPVEGSLVAFGYRDLQNATKNFSEKLGGGGFGYVFKGTLADSSFVAVKRLESISQGEKQFRSEVSTIGTVQHVNLVRLRGFCSEGAKKLLVYDYMPNGSLDFHLFKNQNSEVLDWKVRYQIALGTARGLTYLHEKCRDCIIHCDVKPENILLDADFCPKVADFGLAKLVGREFSRVLTTMRGTRGYLAPEWISGVAVTAKADVYSYGMMLFEFVSGRRNSDPSEDGQVKFFPTFAANVVIQGGNVLSLLDPRLEGNADIEEVTKVIKVASWCVQDSESFRPSMGQVVQILEGIMDVNVPPLPRSLQVFEENPEKLVFFTDSSSNQSSQVRSNVSGTSSQVKSSISSASNKSMEEN* 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1365 833 SMART blect_4 33 156 IPR001480 -
Lja3g1365 833 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 4 798 - -
Lja3g1365 833 SMART serkin_6 498 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g1365 833 Pfam Protein kinase domain 501 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g1365 833 CDD STKc_IRAK 504 771 - -
Lja3g1365 833 ProSitePatterns Protein kinases ATP-binding region signature. 504 526 IPR017441 GO:0005524
Lja3g1365 833 Pfam PAN-like domain 354 412 IPR003609 -
Lja3g1365 833 CDD PAN_AP_plant 341 431 - -
Lja3g1365 833 ProSiteProfiles PAN/Apple domain profile. 345 431 IPR003609 -
Lja3g1365 833 PIRSF SRK 1 824 IPR024171 GO:0004674
Lja3g1365 833 ProSiteProfiles Bulb-type lectin domain profile. 27 149 IPR001480 -
Lja3g1365 833 Gene3D - 24 154 IPR036426 -
Lja3g1365 833 CDD B_lectin 33 156 IPR001480 -
Lja3g1365 833 MobiDBLite consensus disorder prediction 797 833 - -
Lja3g1365 833 Gene3D Phosphorylase Kinase; domain 1 466 572 - -
Lja3g1365 833 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 221 IPR036426 -
Lja3g1365 833 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Lja3g1365 833 Pfam S-locus glycoprotein domain 215 324 IPR000858 GO:0048544
Lja3g1365 833 Pfam D-mannose binding lectin 76 182 IPR001480 -
Lja3g1365 833 Gene3D Transferase(Phosphotransferase) domain 1 573 776 - -
Lja3g1365 833 SUPERFAMILY Protein kinase-like (PK-like) 484 803 IPR011009 -
Lja3g1365 833 SMART ntp_6 355 430 IPR003609 -
Lja3g1365 833 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 4 798 - -
Lja3g1365 833 ProSiteProfiles Protein kinase domain profile. 498 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1365 Lja-Chr3 14273124 14275993 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1365 454 778 Receptor kinase-like Gene Family AT5G20050 42.222 9.48e-80 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lja3g1365 Pkinase 5.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1365 - - gmx:100782119 1238.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1367 3 14280157 14282622 Lja3g1365 3 14273124 14275993 PCT