Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1357 ATGGCAGAACCACCTAGTGTCTATAAGCTTGTTGAGCAATGTCAGATTGTTCCAGCAAATTCAAGAGCAAGAAGAACCACTTCTCTTCCCCTCACATTCCTAGACTTGCCATTAGCAGGTCCTATTTATGTTAGACGCCAATTCTTCTATCAGTTTCCACACCCCACCCACCATTTCTACAATTCCACACTCCCAACTCTCAAACATTCTCTTTCCCTCACCCTTCAACATTTCTACCCTCTCGCCGGAAACCTCATCTGTCCTCCACCACCACACAAGCCCTTCATTCACTGCACCGATGATCATGACTCCGTCCCCTTCACCGTCATTGAATCCGCAGCTGATTTCAAGCATCTCTCATCCAACCACCCCAAACTTCTCAATGAGTTGAAACACCTGGTTCCCAAATTGACCCCCACAAATGATGGTGATCATGATGATGGTAATGACAACACCTTCATCTTCCCCCTGTTGGCATTGCAAGCCACTGTTTTCCCAAACCATGGCATCTGCATCTCCATCACTTACTGCCACATAATGGACGATTTCTGCTGCAGTCAATTCATGAAGACTTGGTCATCCATTTGTCAAACAGGTGAAGCGTTGCAGGACACCAAGGGACTAGAGGGTGTTTTCTTAAGAGACTATTTTGAAGAGAGGTCAAATTGGAAACACAAATTCATTGCTCCAACTTCTGATCATGATGACTATGTTAAGGCAACAATTGTGTTCAGTAGAGAAAAAATTGAGGGTCTGAAAAAATGGGTGTTGAATCAATGGAAGAAAAATGTATCAAAATTTGTGGTGACTTGTGCATTTGTGTGGGCTAGTTTGGTGAAAACAAGATATAGAAATGGTGATGATGAACAAGAAGAAGAGTATTTTCGTTTTGCAGCAGATTGTAGAGATCGTCTTGAGTACCCTATACCAGAGGGTTACTTTGGAAACTGCTTAGCACTGTGCCATGCGACATTGCAGAGAAAGAAGCTTTTGGAAGAACAAGGTTTTATGAATGCAGTGAAGGTGATTGAAAGGGCAGTGAGTGACATGAAGAAGGAACCGTTTAAGGATGCTGAGGATTGGAGGGTTTTGTTTAGGAAGATGTTTGTGTCGGGAAGTGTGTTGCTGGTTACAGGGTCGCCTAGGTTTGGTGTTTATGGGACTGATTTTGGGTTTGGAAGACCTGTTAAAGTGGAGATGGTGCATTCATTCAAAGGTGTGTCTCTTGCTGAGTGTGGAGATGAGGATGGAGGACTTGAGTTTGGGTTGGTTTTTAGAAAAGGGGAGTTTGATTGTTTTGTTTCTGTCATTGAACAAGGACTTGAAGCTTTTGCTTTTCAATCCTAA 1347 0.4313 MAEPPSVYKLVEQCQIVPANSRARRTTSLPLTFLDLPLAGPIYVRRQFFYQFPHPTHHFYNSTLPTLKHSLSLTLQHFYPLAGNLICPPPPHKPFIHCTDDHDSVPFTVIESAADFKHLSSNHPKLLNELKHLVPKLTPTNDGDHDDGNDNTFIFPLLALQATVFPNHGICISITYCHIMDDFCCSQFMKTWSSICQTGEALQDTKGLEGVFLRDYFEERSNWKHKFIAPTSDHDDYVKATIVFSREKIEGLKKWVLNQWKKNVSKFVVTCAFVWASLVKTRYRNGDDEQEEEYFRFAADCRDRLEYPIPEGYFGNCLALCHATLQRKKLLEEQGFMNAVKVIERAVSDMKKEPFKDAEDWRVLFRKMFVSGSVLLVTGSPRFGVYGTDFGFGRPVKVEMVHSFKGVSLAECGDEDGGLEFGLVFRKGEFDCFVSVIEQGLEAFAFQS* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1357 448 Pfam Transferase family 15 434 - -
Lja3g1357 448 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 8 444 - -
Lja3g1357 448 PANTHER - 8 444 - -
Lja3g1357 448 Gene3D - 237 444 IPR023213 -
Lja3g1357 448 Gene3D - 8 236 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1357 Lja-Chr3 14196681 14198075 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1357 20 396 Monolignol Biosynthesis Gene Families AT5G48930 23.940 2.33e-14 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1357 - - aprc:113855905 622.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1357 3 14196681 14198075 Lja3g1357 3 14196681 14198075 ECH