Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1340 ATGCCCACCAAACCCTGTTGCCAAAAACAGAGTCTTTTTGGAGAGAAAATGGCGAATGCGGTGGAAAATGAAAATGGGTTGACGACTATGACGATGATGTTCAGTGATGATGAGTTGAAGGAGGTGAGTGGGGTGAAGCAAGTTGGTGGAGATTATGTGGAGGTAACGTGTGGATGTACCAGCCATAGGTATGGTGATGCTGTTGGAAGGCTTAGGGTTTTTGTTAATGGATACCTTGAAATCTCTTGTGAATGCACCCCTGGTTGCCAAGAAGGCAAGTTGACCCCTGCTGCTTTTGAGAAACACTCTGGAAGAGAGACAGCCAGGAAATGGAAGAACAATGTCTGGGTAATAGTCAATGGTGAGAAGGTTCCATTGTATAAAACAGTGCTGCTCAAATACTACAATCAAGCATTAAGAACAGCACATGGGTCTGGACGTGCTTGCCACCGTGATGAGTTCATTCGCTGTACTAGATGTAACAAAGAGCGCCGGTTTCGCCTCAGAACTAAAGAGGAATGCCGCCTTCACCATGATGCTTTGGCTGATCCAAATTGGAAATGTTCTGATCTTCCGTATGACAAAATTACATGTGATGTTGAAGAAGAGAGAGCAAGTCGCAGAGTTTACAGGGGATGCACTGGTTCTCCTGCATGCAAAGGATGCACTTCTTGTGTGTGCTTTGGCTGTGACATTTGCAGATTTTCAGACTGCACTTGCCAGACTTGCACTGACTATACAAGGAATAATGCCAATGCTTGA 762 0.4514 MPTKPCCQKQSLFGEKMANAVENENGLTTMTMMFSDDELKEVSGVKQVGGDYVEVTCGCTSHRYGDAVGRLRVFVNGYLEISCECTPGCQEGKLTPAAFEKHSGRETARKWKNNVWVIVNGEKVPLYKTVLLKYYNQALRTAHGSGRACHRDEFIRCTRCNKERRFRLRTKEECRLHHDALADPNWKCSDLPYDKITCDVEEERASRRVYRGCTGSPACKGCTSCVCFGCDICRFSDCTCQTCTDYTRNNANA* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1340 253 PANTHER PROTEIN ULTRAPETALA 1 28 250 - -
Lja3g1340 253 ProSiteProfiles SAND domain profile. 37 149 IPR000770 GO:0003677
Lja3g1340 253 PANTHER PROTEIN ULTRAPETALA 1 28 250 IPR020533 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1340 Lja-Chr3 14017994 14020765 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF ULT Lja3g1340 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1340 - - gmx:100796203 428.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1340 3 14017994 14020765 Lja3g1340 3 14017994 14020765 ECH