Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1336 ATGGGTGTGGAACGATCTGCTTCACAGTACAAGAGAGTGAAAATCCATGGACAAGTTCTTTTGGGGTTTATGTTGATCTGCATAGTTCAATTTTCACTTGCAGACACTAATCCCACTGATGTTGCGGCAATTAATCGCTTATATGCTGCATTGGGCAGCCCTGCTCTTCCTGGGTGGGTTTCTAGTGCGGGAGATCCGTGCGGAGAAGCATGGCAGGGCGTTCAATGTAATGGTTCACTCATACAAGCAATAGTTCTGAATGGTGCGAATTTGGGAGGAGAACTCGGTGAGAGCTTGGGGCCATTTGTTTCTATCCAAGAGATAGCTCTAAGCAACAACCACATCGGGGGAAGTATTCCATCCGGTTTGCCAGTGACCTTGCAAAACTTTTTTCTTTCAGGTAACCAGTTCACTGGAAGTATTCCAACCTCTTTATCCACATTGACCGAACTGATCGCCATGTCTCTTAACGACAATCTTTTAACTGGAGAAATACCAGATGCCTTTCAGTCTCTTACAAAATTGACCAATCTAGATTTATATAATAATAACTTGAGTGGGGAGTTGCCTCCATCTCTGGAGACTTTGTCAGCTCTGACCACCCTAAATTTACAGAACAATAATCTGTCTGGGACCCTTGACGTTTTACAAGACCTTCCACTGCAAGAATTGAATGTCGAGAACAACCAATTTACTGGATCAATACCTCAAAAGTTGTTAAGCATCCCAAAGTTCAGTAAAGATGGAAATCCATTCGATCTTATTGGCAATGCAACTATAGCTCCGGCTCATCCACCTCGTTCTCCAGTGACTGCACCACCATCCGGAAATTTGGTTTTTGGGACACCATCTTCTGGGCGTGTACCTGCTAAACAGGCTCATGGACCAAGTGCAGCAATTGAATCAAGTTCTGGGAAATCAAAAACACACATGAAAAGGGTGGTTTGGATATGTATTTCTGGTGTATTGGTGTTTATTATTTTTGCACTGGGACTTGCTATCTTTATTCCAAGATGTAGCAGAAAAGAACGGGTTGAGAGAACTTCCAAGCAACATCTAATTGGTGCATATGGACGTGAAAGACAGAATCCTAGGGATAATGGAGCTTTAGTGCAACCACCCAGACAAACTGAGAAAGTGCCCAAAGGGGCTGTTGTCAGGCCAAAAGAGGATCATCAAGCAGAGAAAGATGAGCAAAGAAGAGGAACAATACCAAAGTTGTTAGAGCAAGAGATTGATATGAGTGGATTAGATGAATTTTCAATGCCTCCACCACCCCCACCTCCTCCACCACCACCTCCTGCTCCACCCCTTATTGCTGAGAGGGTGATTGTTGAGCCAACCACAATCAGCGGAGGGGCTAATATCAATCATCCTAAAAAAAGTCCAGCTCCTCCCACTTTTGCCAAATCTTTCACCATTGCATCCCTTCAACAGTATACAAATAGCTTTTCTCAAGACAATCTTATAGGATTAGGCATGCTGGGGAGTGTGTACAGGGCAGAGCTTCCTGATGGGAAGATACTTGCTGTGAAGAAACTAGACAAGAGAGTTTCTGATCACCAAAAGGATGATGAGTTTCTTGAATTGGTTAACAGTATTGACAGAATCCGGAATGCAAATATTGTTGAGCTTATGGGGTACTGTTTAGAGCATGGTCAAAAGCTTCTGGTCTATGAGTACTGCAATAATGGGTCTCTGCAGGAAACACTTCATTCAGATGATGAATTCAAAGCAAGACTTTCTTGGAATACTCGCATCCGGATAGCACTGGCTGCAGCTACAGCCTTAGAGTACTTGCATGAGCAATGTCAGCCACCTGTTGTGCACAGAAATTTCAAGTCTGCTAACATTCTCCTTGATGATGATCTATCAGTGCGGGTATCTGATTGCGGCCTGGCTCCATTAATAACTAAAGGTTCTGTGAGTCAGCTCTCAGGGCAACTGCTAACCGCTTATGGCTATGGAGCTCCAGAATTTGAGTCCGGAATTTACACATACCAGAGTGACGTGTACAGCTTTGGTGTGGTTATGTTAGAACTTTTGACAGGCCGGCAGTCCTATGACAGGACACGCCCTCGAGGGGAACAGTTTCTGGTAAGATGGGCAATTCCTCGACTTCATGATATTGATGCATTATCAAGGATGGTTGATCCCTCTCTCAATGGAGATTACCCTCCCAAATCACTGTCAACTTTTGCTGACATTATTTCTAGATGTGTTCAGTCAGAGCCAGAATTTAGGCCAGCCATGTCAGAGGTTGTGCTGTACTTATTAAATATGATAAGGAAGGAATCTCAGCAAAATGAAAAATGA 2316 0.437 MGVERSASQYKRVKIHGQVLLGFMLICIVQFSLADTNPTDVAAINRLYAALGSPALPGWVSSAGDPCGEAWQGVQCNGSLIQAIVLNGANLGGELGESLGPFVSIQEIALSNNHIGGSIPSGLPVTLQNFFLSGNQFTGSIPTSLSTLTELIAMSLNDNLLTGEIPDAFQSLTKLTNLDLYNNNLSGELPPSLETLSALTTLNLQNNNLSGTLDVLQDLPLQELNVENNQFTGSIPQKLLSIPKFSKDGNPFDLIGNATIAPAHPPRSPVTAPPSGNLVFGTPSSGRVPAKQAHGPSAAIESSSGKSKTHMKRVVWICISGVLVFIIFALGLAIFIPRCSRKERVERTSKQHLIGAYGRERQNPRDNGALVQPPRQTEKVPKGAVVRPKEDHQAEKDEQRRGTIPKLLEQEIDMSGLDEFSMPPPPPPPPPPPPAPPLIAERVIVEPTTISGGANINHPKKSPAPPTFAKSFTIASLQQYTNSFSQDNLIGLGMLGSVYRAELPDGKILAVKKLDKRVSDHQKDDEFLELVNSIDRIRNANIVELMGYCLEHGQKLLVYEYCNNGSLQETLHSDDEFKARLSWNTRIRIALAAATALEYLHEQCQPPVVHRNFKSANILLDDDLSVRVSDCGLAPLITKGSVSQLSGQLLTAYGYGAPEFESGIYTYQSDVYSFGVVMLELLTGRQSYDRTRPRGEQFLVRWAIPRLHDIDALSRMVDPSLNGDYPPKSLSTFADIISRCVQSEPEFRPAMSEVVLYLLNMIRKESQQNEK* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1336 771 ProSiteProfiles Protein kinase domain profile. 484 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g1336 771 Gene3D Phosphorylase Kinase; domain 1 455 561 - -
Lja3g1336 771 PANTHER OS01G0253100 PROTEIN 25 770 IPR045271 GO:0004714|GO:0006468
Lja3g1336 771 ProSiteProfiles Leucine-rich repeat profile. 198 220 IPR001611 GO:0005515
Lja3g1336 771 SUPERFAMILY Protein kinase-like (PK-like) 462 758 IPR011009 -
Lja3g1336 771 SUPERFAMILY L domain-like 37 242 - -
Lja3g1336 771 Pfam Leucine rich repeat 126 185 IPR001611 GO:0005515
Lja3g1336 771 SUPERFAMILY Formin homology 2 domain (FH2 domain) 424 434 - -
Lja3g1336 771 MobiDBLite consensus disorder prediction 420 438 - -
Lja3g1336 771 Pfam Leucine rich repeat N-terminal domain 38 77 IPR013210 -
Lja3g1336 771 Gene3D Ribonuclease Inhibitor 37 257 IPR032675 -
Lja3g1336 771 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED 25 770 - -
Lja3g1336 771 MobiDBLite consensus disorder prediction 282 305 - -
Lja3g1336 771 Pfam Protein tyrosine and serine/threonine kinase 487 756 IPR001245 GO:0004672|GO:0006468
Lja3g1336 771 MobiDBLite consensus disorder prediction 345 438 - -
Lja3g1336 771 MobiDBLite consensus disorder prediction 382 407 - -
Lja3g1336 771 Gene3D Transferase(Phosphotransferase) domain 1 562 771 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1336 Lja-Chr3 13983172 13989651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1336 26 765 Strubbelig Receptor Gene Family AT4G03390 61.722 0.0 852
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lja3g1336 PK_Tyr_Ser-Thr 7.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1336 - - gmx:100811490 1184.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1336 3 13983172 13989651 Lja3g1336 3 13983172 13989651 ECH
Lja3g1336 3 13983172 13989651 Lja3g1336 3 13983172 13989651 PCT