Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1307 ATGGCGTCTGGACCATCCGGCCTCAGCAACTGCAGTTCCAAGGGATTTGATTTTCGCTCCGATGATGTTCTCTGTTCATACGAGGATTTTACCGAGCAGGATTCTTCTAATGGCAATAACATCGATCCCAGTAAGGATTTTCACATATCAAGGATGACAAAAGCAGCAGCATTGCCTGCTACTGCCTATGGCTCACCTGAAGGTTCTTTAGGCCAAGATGTGATTGCAACAGTTGAGAAGAGTATAAAAACATATTCTGACAACCTTATGAGGTTTCTTGAGGGAATTGGTTCAAGGCTATCACAGTTGGAATTATATTGTTATAATCTTGACAAATCAATTGGGGAAATGCGATCTGATTTGAACAGTGACCATGAGGAGGCAGATTCAAAACTCAAATCTATTGAGAAACACGTTCAGGAAGTACATAGGTCTGTACAAATTTTAAAAGACAAGCAAGAGCTAGCTGACGCTCAGAAAGAATTAGCCAAGCTTCAACTTGTACAGAAAGAATCCTCTCCAAGCCGTCGACAGTCCTATGAGGGGAGATCTTCACCTTCTGCCACGGATCAGAAAAGAACTGATAATGCATCTGACACGAACAACCAGCAGTTAGCTCTTGCACTCCCTCATCAAGTTGCCTTCCAGCACCAACCAGTGACAGCCCCCTCTCAAGCTCCAGCCTCAAATGTGACCCAAGCCACGCAACAACTCAGTTATTACATGTTGCCCGCCTCTTTGCCCAATCCACCAGCCATGACCCACTTTCCCCAGAATCAGTATCTGTCTTCTGATCCGCGGTACCAGAATCCACAACCAACATCATCTCAGGTAACCATGTCCCCGCCTGTACAACAGTTTTCTCAGTATCAGCAGCAGCCACAGCAACAGCATTGGCCTCAACAATCACCTCAGGAGGTTGCACCTCCGCAACCACCCTCAATGCAGTTTCAAATGAGACCCTCATCAACTAATACTTACACTCCATATCCTACAAGCCAAGCTGCAAATCCACCTCCCAAAGAAACACTGCCTAATAGCTTGCCAATGCAAATGCAATATTCAGGGATTCCACCCTCAGGATCCGGCCGCGGTGCTGCCACGCCTTATGGATATAATGGCACCGGTAGGAGTACAGTTGCACAGCAACCTCCGCCCCAGCAAATCAAGAGCTCTTTTCCAGCACAACCAGGGGATATGTATGGAACCCATGCCACGCCTCCTCCTGCTAGTTCATACATGACGTATGATTCTGACGGTGGCAGAGCACATTATACAGCCCAACATTCTTCTCATTATGCTCAAGCTGGATACCCTCCCACAAGTGCTTCCCTTCAGAACCCTGCACCCCATAATCTCATGGTCCGGAATCCTAGCCAGCCGCCGCAATTCACACGGAGCCATCCCTACAATGATCTGATTGAAAAGTTGGTGAACATGGGATTCAGAGGCGATCATGTAGGAAGTGTTATCCAGAGGATGGAGGAAACAGGGCAGCCTGTAGATTTTAACTCGTTACTTGACCGTTTGAATGTACTTAGTTCAGTAGGTCCCCAGAGGGGATGGTAA 1569 0.4723 MASGPSGLSNCSSKGFDFRSDDVLCSYEDFTEQDSSNGNNIDPSKDFHISRMTKAAALPATAYGSPEGSLGQDVIATVEKSIKTYSDNLMRFLEGIGSRLSQLELYCYNLDKSIGEMRSDLNSDHEEADSKLKSIEKHVQEVHRSVQILKDKQELADAQKELAKLQLVQKESSPSRRQSYEGRSSPSATDQKRTDNASDTNNQQLALALPHQVAFQHQPVTAPSQAPASNVTQATQQLSYYMLPASLPNPPAMTHFPQNQYLSSDPRYQNPQPTSSQVTMSPPVQQFSQYQQQPQQQHWPQQSPQEVAPPQPPSMQFQMRPSSTNTYTPYPTSQAANPPPKETLPNSLPMQMQYSGIPPSGSGRGAATPYGYNGTGRSTVAQQPPPQQIKSSFPAQPGDMYGTHATPPPASSYMTYDSDGGRAHYTAQHSSHYAQAGYPPTSASLQNPAPHNLMVRNPSQPPQFTRSHPYNDLIEKLVNMGFRGDHVGSVIQRMEETGQPVDFNSLLDRLNVLSSVGPQRGW* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1307 522 Pfam UBA-like domain (DUF1421) 470 512 IPR010820 -
Lja3g1307 522 Coils Coil 148 168 - -
Lja3g1307 522 MobiDBLite consensus disorder prediction 252 304 - -
Lja3g1307 522 MobiDBLite consensus disorder prediction 166 198 - -
Lja3g1307 522 MobiDBLite consensus disorder prediction 317 332 - -
Lja3g1307 522 MobiDBLite consensus disorder prediction 372 394 - -
Lja3g1307 522 PANTHER FORMIN-LIKE PROTEIN (DUF1421) 1 522 - -
Lja3g1307 522 MobiDBLite consensus disorder prediction 251 409 - -
Lja3g1307 522 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1307 Lja-Chr3 13691000 13694487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1307 74 174 Trihelix Transcription Factor Family AT5G14540 34.653 2.13e-18 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1307 - - gmx:100782994 651.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1307 3 13691000 13694487 Lja3g1307 3 13691000 13694487 ECH