Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1300 ATGTCTCCACTTAAGCTCATTTTCATTCTTCTCCACACAGTTACCATTCTGAGTTCTGTTTCCACTACTGAATTTGTCTACAACACAAACTTCAACTCCACAAACACCATCCTATATGGAAATGCCACCATTGAACACTCCATTCTGACTCTCACTAATGGTAGTTTCTTCTCCATAGGCCGCGCTTTTTATCCTCACAAAATACCTACCAAACCGGCCAACTCCTCCTCCACCCTTCTCCCCTTTGCAACCTCCTTCATTTTCTCGGTCGCCCCCATCAAACACCTTCTTCCCGGTCACGGCTTTGCCTTCCTGTTTACACCGTCAAGAGGTGTAAACGGCACGACCTCAGCGGAGTATCTTGGTCTTTTCAATCATACCAATGAAGGCAATCCAAAGAACCATGTTTTGGGAGTTGAGTTTGATACAATCAGAAATGAGGAAGAGTTCGATGACATAAACGGAAATCATGTTGGCGTTGATATAAACTCGCTTGCATCCTCCGCATCACATGAAGCTGGCTACTGGGGTGGGAAAGATGACAATGAATTTGAGGTGTTGAGGATAACAAATGGAGAAAACTACCAGGTATGGATTGAATTTAACCATTCCCAGCTTAACGTTAGTATGGCTCGCGCAGGACAAAAGAGGCCGCGAGTGCCTCTCATCAGTACGAATGTTAACCTTTCCAAGGTTCTCATAGATGAAACTTATGTTGGGTTCTGCACAGCAACAGGGAAAATAGTAGACAGTGTTAAGATTCTTGCTTGGAGTTTTAGCAATTCAAATTTTTCAATTGGAAATGCTTTGATGACAGAAAATTTGCTTTCATTTGTCCATCATAAAAGTTGGTTTTCCGGAGCACGAGGTTTAGCTGTAGGGATCACGAGTGTTGTCTGTGTGTTGATCACTGGTTGCGCTTGTACGGCATTTTTCATGCTCCGTAGAGGAAACGAGGCGGTGGAAGATATTGAAGACTGGGAACTAGAGTACTGGCCACACAGGATTAGCTTTCATGAGATTGATGCAGCAACAAGAGGGTTCTCTGAAGAGAATGTGATTGCGATAGGAGGAAGTGGGAAGGTATATAAAGGGGTTTTGCAAGGAGCAGAGGTTGCAATCAAGAGAATCCCTCAGGAAAGAGAAGGAGGGATGAGAGAGTTTTTGGCTGAGGTTTCAAGCATAGGCAGAATGAAACACAGAAACTTAGTAGCATTGAGAGGCTGGTGCAAAGAGCAGAAAGGAACTTTGATTCTAGTCTATGACTTCATGAATAATGGAAGCTTAGACAATAGGATCTTTGACTGTGAAGAGGGAAAGATGCTAACTTGGGAAGAGAGGATTGGAGTTTTGAAAAATGTAGCAGCAGGGGTTCTATACCTGCATGAGGGTTGGGAAGTTAAGGTCTTGCATAGGGACATCAAAGCAAGCAATGTTCTACTTGACAAAGACATGAAAGCTAGGTTGGGCGATTTCGGATTGGCGCGTATGCACGGGCACCAGGGACAAGTGGCCAGTACAACAAGAATACTAGGGACAGTGGGATACATTGCTCCTGAAGTGATTCGAACCGGAAGAGCGTCAACCATGTCTGATGTGTTTGGTTTTGGAATACTAGTACTGGAAGTAGTTTGTGGGAGAAGACCAATTGAAGAACATAAACCAGGGCTAATTGAATGGGTTATGTCCCTAATGGTGCTTGGCCAACTGCAGAATGCTGTTGATGAAAGGTTGAATGCTTATGGGGGATACACCATCAGGGAAGCTGAGAGATTGCTACATTTGGGTTTAATGTGTGCAAATTCAGACCCTAGTGTGAGGCCAACCATGATGGAGGTTGTGAAAATGCTGGAGGGTGATGAAGGGAGTGAATATTTGAGTTTGCTTGGGAAAATAAAATCAGCTGCAATGTGGTCTAGAACTGAAGGTGCTTTTGATCAAATTAGGATATTCAGTTTTAATTCTAAGGCGTCCACAAGTTGCTCAGGTCCAGAATCAAATTCAAATACAATCCTAGAAGGCAGGTAA 2028 0.4364 MSPLKLIFILLHTVTILSSVSTTEFVYNTNFNSTNTILYGNATIEHSILTLTNGSFFSIGRAFYPHKIPTKPANSSSTLLPFATSFIFSVAPIKHLLPGHGFAFLFTPSRGVNGTTSAEYLGLFNHTNEGNPKNHVLGVEFDTIRNEEEFDDINGNHVGVDINSLASSASHEAGYWGGKDDNEFEVLRITNGENYQVWIEFNHSQLNVSMARAGQKRPRVPLISTNVNLSKVLIDETYVGFCTATGKIVDSVKILAWSFSNSNFSIGNALMTENLLSFVHHKSWFSGARGLAVGITSVVCVLITGCACTAFFMLRRGNEAVEDIEDWELEYWPHRISFHEIDAATRGFSEENVIAIGGSGKVYKGVLQGAEVAIKRIPQEREGGMREFLAEVSSIGRMKHRNLVALRGWCKEQKGTLILVYDFMNNGSLDNRIFDCEEGKMLTWEERIGVLKNVAAGVLYLHEGWEVKVLHRDIKASNVLLDKDMKARLGDFGLARMHGHQGQVASTTRILGTVGYIAPEVIRTGRASTMSDVFGFGILVLEVVCGRRPIEEHKPGLIEWVMSLMVLGQLQNAVDERLNAYGGYTIREAERLLHLGLMCANSDPSVRPTMMEVVKMLEGDEGSEYLSLLGKIKSAAMWSRTEGAFDQIRIFSFNSKASTSCSGPESNSNTILEGR* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1300 675 ProSitePatterns Legume lectins beta-chain signature. 137 143 IPR019825 -
Lja3g1300 675 Gene3D - 21 268 - -
Lja3g1300 675 Gene3D Phosphorylase Kinase; domain 1 314 423 - -
Lja3g1300 675 CDD lectin_legume_LecRK_Arcelin_ConA 23 262 IPR001220 GO:0030246
Lja3g1300 675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Lja3g1300 675 Pfam Protein kinase domain 350 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g1300 675 CDD STKc_IRAK 354 619 - -
Lja3g1300 675 PANTHER LECTIN RECEPTOR KINASE 1 664 - -
Lja3g1300 675 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 262 IPR013320 -
Lja3g1300 675 ProSiteProfiles Protein kinase domain profile. 348 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g1300 675 PANTHER - 1 664 - -
Lja3g1300 675 Pfam Legume lectin domain 23 263 IPR001220 GO:0030246
Lja3g1300 675 SMART serkin_6 348 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g1300 675 SUPERFAMILY Protein kinase-like (PK-like) 323 618 IPR011009 -
Lja3g1300 675 Gene3D Transferase(Phosphotransferase) domain 1 424 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1300 Lja-Chr3 13608092 13610119 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1300 20 565 Receptor kinase-like Gene Family AT4G04960 56.781 0.0 602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lja3g1300 Pkinase 5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1300 - - gmx:100804553 1055.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1299 3 13593897 13595933 Lja3g1300 3 13608092 13610119 PCT
Lja3g1300 3 13608092 13610119 Lja3g1300 3 13608092 13610119 PCT