Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1293 ATGACTATGGGGTCTTATCACCAATTTCTATGCCCAATTCTTTTGATAATTTCCATGGTGATTCTCGCCTCTTCATCATCCTCTCAAGCATACAAATTCATTGTTGGAGGCAAAGATGGCTGGGTGGTGAAGCCCTCAGAAAAATACAGCCATTGGGCAGAAAGAAACCGATTTCAAGTCAATGATACCCTTTATTTCAAGTACAAGAAAGGATCTGATTCAGTGGCAGTGGTTACAAAAGAAGACTATGATGCATGCAACCCCAAGAACCCCATTCACATAATGGACGGTGGAGATTCAACGTTCCAATTTGATAGATCAGGTCTCTTTTTCTTCATCAGTGGCAACGTTGAGAACTGCCAACATGGTCAAAAGCTGATTGTTGTAGTTCTGGCGGTCATACACAACCAGCACCACCACAGTGATCAATCACCATCTCCATCTGCACCGCCGTCATCCCCCGTGCCTCCTCCAGCGGAAGCTCAACCACATGTTAGGAGCGGCCCATCCCCAATGCCGAGTCCAGGCCCATCCGGCATAGAGGCCCCGGCACCGGCTCCGGCAAGTCATTCGGGTTCTACAAGGCTTGGTGGTGTCGCTTTGGGTGTTAGTGTTAGGGTGGCTTTGTTGTTCTTTGTTTAA 642 0.4782 MTMGSYHQFLCPILLIISMVILASSSSSQAYKFIVGGKDGWVVKPSEKYSHWAERNRFQVNDTLYFKYKKGSDSVAVVTKEDYDACNPKNPIHIMDGGDSTFQFDRSGLFFFISGNVENCQHGQKLIVVVLAVIHNQHHHSDQSPSPSAPPSSPVPPPAEAQPHVRSGPSPMPSPGPSGIEAPAPAPASHSGSTRLGGVALGVSVRVALLFFV* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1293 213 Pfam Plastocyanin-like domain 41 124 IPR003245 GO:0009055
Lja3g1293 213 PANTHER EARLY NODULIN-LIKE PROTEIN 2 13 150 - -
Lja3g1293 213 MobiDBLite consensus disorder prediction 147 182 - -
Lja3g1293 213 CDD OsENODL1_like 31 131 IPR041846 -
Lja3g1293 213 Gene3D - 29 134 IPR008972 -
Lja3g1293 213 MobiDBLite consensus disorder prediction 138 192 - -
Lja3g1293 213 PANTHER BLUE COPPER PROTEIN 13 150 IPR039391 GO:0009055
Lja3g1293 213 SUPERFAMILY Cupredoxins 30 131 IPR008972 -
Lja3g1293 213 ProSiteProfiles Phytocyanin domain profile. 31 132 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1293 Lja-Chr3 13547879 13549253 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1293 13 205 Phytocyanin Superfamily AT4G28365 45.960 9.80e-51 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1293 - - lja:Lj3g3v2809780.1 375.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1293 3 13547879 13549253 Lja3g1293 3 13547879 13549253 PCT