Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1291 ATGATGACTGATGGATTCCATTCACAGCATCCATCGGTAGCCCAGAAGTTAGCTGGACATTCTTATCTTGTGTCCAGGCTCTCCCCTAATCAATCCAGAAACTATTCCACAACTAGTACTCACTTCAATGGAGTTGTGCCGTCTGCAAGTTTGGCTCCAGTGTTTGTGCCTGCTCCAGCTGAGAAAGGGGCATCTGCATTTTTGGTGGATTTTCTCATGGGTGGAGTTTCAGCTGCTGTGTCTAAGACGGCTGCAGCTCCAATTGAACGAATTAAGTTACTCATTCAAAACCAGGATGAAATGATCAAGAGCGGACGATTGTCTGAACCTTACAAGGGAATTGGTGATTGTTTTGCTCGAACTACTAAGGATGAAGGAGCGATTGCTCTTTGGAGAGGAAATACTGCTAATGTTATCAGATACTTCCCTACTCAGGCTCTAAACTTTGCTTTTAAGGATTACTTCAAGAGGCTTTTCAATTTTAAAAAAGACAAAGATGGCTACTGGAAGTGGTTTGCTGGGAATTTGGCATCTGGTGGGGCTGCTGGTGCTTCCTCCCTCTTATTTGTCTATTCTTTGGACTATGCCCGTACACGTTTAGCCAATGATTCAAAGTCTGCAAAGAAGGGTGGTGAGAGGCAGTTCAATGGCTTGGTTGATGTGTACAAGAAAACCATTCAGAGTGATGGTATTGCTGGCCTTTATCGTGGATTCAGCATCTCATGTATTGGAATTATAGTTTATCGTGGTCTATACTTTGGAATGTATGATTCTCTGAAACCAGTGGTTTTGGTTGGTGACATGCAGGATAGTTTCTTTGCTAGTTTCCTTTTGGGATGGGGGATCACAATAGGTGCTGGCTTGGCCTCTTACCCCATTGATACAGTGCGTAGAAGGATGATGATGACATCTGGAGAAGCTGTAAAATACAAGAGCTCTCTGGATGCGTTCAAAGTTATCATTGCAAAAGAGGGTACTAAGTCGCTCTTCAAAGGTGCTGGTGCGAACATACTGCGTGCTGTTGCAGGTGCTGGGGTGCTTGCTGGTTATGATAAGCTACAGCTCATCGTGTTCGGAAAGAAATATGGTTCTGGTGGTGGAGGCTAA 1107 0.4426 MMTDGFHSQHPSVAQKLAGHSYLVSRLSPNQSRNYSTTSTHFNGVVPSASLAPVFVPAPAEKGASAFLVDFLMGGVSAAVSKTAAAPIERIKLLIQNQDEMIKSGRLSEPYKGIGDCFARTTKDEGAIALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDSKSAKKGGERQFNGLVDVYKKTIQSDGIAGLYRGFSISCIGIIVYRGLYFGMYDSLKPVVLVGDMQDSFFASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFKVIIAKEGTKSLFKGAGANILRAVAGAGVLAGYDKLQLIVFGKKYGSGGGG* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1291 368 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 26 367 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lja3g1291 368 PRINTS Adenine nucleotide translocator signature 275 291 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lja3g1291 368 PRINTS Adenine nucleotide translocator signature 170 183 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lja3g1291 368 PRINTS Adenine nucleotide translocator signature 144 156 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lja3g1291 368 PRINTS Adenine nucleotide translocator signature 67 79 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lja3g1291 368 PRINTS Adenine nucleotide translocator signature 111 132 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lja3g1291 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 65 158 IPR018108 -
Lja3g1291 368 Pfam Mitochondrial carrier protein 169 262 IPR018108 -
Lja3g1291 368 Pfam Mitochondrial carrier protein 67 162 IPR018108 -
Lja3g1291 368 Pfam Mitochondrial carrier protein 270 355 IPR018108 -
Lja3g1291 368 Gene3D Mitochondrial carrier domain 68 363 IPR023395 -
Lja3g1291 368 PRINTS Mitochondrial carrier protein signature 235 253 IPR002067 GO:0055085
Lja3g1291 368 PRINTS Mitochondrial carrier protein signature 185 203 IPR002067 GO:0055085
Lja3g1291 368 PRINTS Mitochondrial carrier protein signature 83 97 IPR002067 GO:0055085
Lja3g1291 368 PRINTS Mitochondrial carrier protein signature 70 83 IPR002067 GO:0055085
Lja3g1291 368 PRINTS Mitochondrial carrier protein signature 133 153 IPR002067 GO:0055085
Lja3g1291 368 PRINTS Mitochondrial carrier protein signature 279 301 IPR002067 GO:0055085
Lja3g1291 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 170 262 IPR018108 -
Lja3g1291 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 270 356 IPR018108 -
Lja3g1291 368 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 26 367 - -
Lja3g1291 368 SUPERFAMILY Mitochondrial carrier 67 352 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1291 Lja-Chr3 13522308 13526148 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1291 8 358 Antiporters AT4G28390 79.076 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1291 K05863 - gmx:100785990 620.157