Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1269 ATGCATTTGTATCAATCCCCCTCAACTCTCAACTCTAATCTCCATGAATCCCAAACTCTCACTCTCACTCACCATTTGACAACAATTTCACAGTACCACACACACATAGTAGAGGCAGTCATGTCAACAATCACCATGCTTAAGCTTCTCTTCCTGAATGTGCTCCTCTCACTCTCATTCTCAGTCTCTCTCAACCAAGAAGGTCTCTTCCTCCTAAAGGCCAAGCTCCATCTCTCTGACCCTTCCAATTTCCTCTCCAATTGGAACCCAACCGACACCACCCCCTGCAACTGGACTGGCGTCTCCTGCCACCCCATCTCCGCCGCCGTCACCTCCCTCCACCTCGACAACTCCCAGCTCTCCGGCCACTTCCCCACCACCCTCTGCCGCCTCCCCTCTCTCACCTCTCTCTCCCTCTCCAACAACAACCTCAACTCCTCCCTCTCCACCACCGCCCTCTCCGCCTGCACCTCCCTCAACCACCTCAACCTCTCCCTCAACCTCTTCTCCGGCCCCATCCCCGACACGCTCCCGAACCTCCCCCACCTCCGCCTCCTCGACCTCTCCTTCAACAACTTCTCCGGCAGCATCCCAACCACCTTCGGCAACTTCCAACACCTCCACTCCCTCTCCCTCGTCTCCAACCTCCTCACCGGAACCATCCCCGCCACCCTCGGAAACATCTCCACCCTCCAAGAGCTTCATCTCGCTTACAACAACCTCCTCACTGGAACCATCCCCGCCTCCCTCGGAAACCTCACCAACCTCGAGGACCTCTGGCTCGCCGGCTGCAACCTGGCGGGTCCCATCCCGGTTTCTCTGGGAAACCTCTCTCGCCTCCGCAACCTCGACCTGTCACAGAACATGCTCACCGGGACCTTACTGGAAGCCCTTTTCGCCGAGCTGAACAGCATTGTGCAAATCGAAATCTACCAGAACTCCCTCTCCGGCGAGTTACCTCGCGCCGGAATCGTCAACCTGACCCGGTTAGAACGATTCGACGCTTCGTATAACGAGTTAACCGGGACGATTCCAGACGAGTTTTGCAAGCTGAAGAAACTGGGCTCTCTCTACTTGGACGTGAACCAGCTCCAGGGTTCTCTGCCGGAGTGCATAGCAGGGTCTGAGAGCTTGTACGAGCTCATGCTATTCAACAACACGCTCTCGGGTGAGTTACCCAATGATCTAGGAAGCAACTCGCAGCTGGAGATCATCGACGTTTCGTATAACCGATTTTCCGGCGAGATTCCGGCGAGCTTGTGCTGGCGAGGAGCGTTGCAGGAGCTTCTACTGCTTCACAATTCATTTTCCGGGGGGATTCCGATGAGTCTGGGGAACTGCACGAGCTTAACGAGGGTTAGGATTGGGAACAATAACCTCTCTGGTGTTGTTCCTGATGGAATTTGGGGCCTGCCCCATTTGCGTCTGCTTGAGCTTGTTGAAAATTCGCTTTCTGGGTCGATTTCAAATGCGATTTCTGGTGCTCAGAATCTGTCAATTTTGTTGCTTTCGAAGAATCAGTTTTCTGGGTTGATTCCTGAGGCAATTGGGTCTTTGAATAATCTGGGAGAGTTTGTGGCCAGCCATAATAGTCTTACTGGTTCGATTCCGGTTAGCATGACCAAGCTGAACCAGTTAGGAAGGCTTGTTCTTAGGGACAATCAACTTTCTGGAGAAATTCCTCAGGGGGTTGGTGATTGGAAGAAGCTCAATGAGCTTGATTTGGCAAATAACAGGTTAGGTGGGAATATTCCTAATGAATTAGGAACCTTGCCAGGGCTTAATTTTCTTGATCTCTCTGGAAATTTGTTATCTGGTGAAATTCCAATTGAGCTGCAGAATTTGAAGCTTGATTTCCTGAATTTGTCAAACAACCAGCTTTCTGGGGAGATCCCTCCTCTTTATGCCAATGAGAATTATAAGGAGAGTTTTCTAGGAAATACAGGCCTCTGTGGTGATCTCCCTGGACTGTGTCCAGGCTTGGGCGAGAGTAGGAATAAGAAGTACGCGTGGATTTTGTGGTTCATATTTGTACTTGCTGGGATTGTGTTAATCACTGGGGTGGCCTGGTTTTACTTTAAATTCAAGAATTTCAAGAAGATGAAAAAGGGATTTAAAATTTCAAAGTGGAGGTCATTTCATAAGCTAGGCTTCAGTGAGCATGAGATTGTTAAATTGATGAGTGAAGATAATGTAATAGGCAGTGGAGCTTCAGGGAAGGTTTACAAAGTGGTGCTGAGTAACGCTGAGGTGGTGGCGGTGAAGAAATTGTGGGGAGCAACTAATGGAATTGACGGATTTGAAGCTGAAGTTGAAACCCTGGGAAAGATTCGGCACAAGAATATTGTGAGGTTATGGTGTTGCTGCAGCAGTGGGGATAGCAAGCTCCTAGTTTATGAGTACATGCCAAATGGGAGCTTAGCTGATTTGTTGCACAGCAGCAAGAAAAACTTGTTGGATTGGCCAACTAGATATAAAATTGCTTTTGATGCTGCTGAGGGGCTTTCTTATTTACATCATGATTGTGCACCCCCTATTGTTCACAGGGATGTGAAATCTAGCAATATCTTGCTAGATGGAGAGTTTGGAGCGAAAGTTGCAGATTTTGGAGTTGCCAAAATTGTCAGGGGAGTTAACCAAGGGGCAGAATCAATGTCTGTGATAGCTGGATCATATGGTTACATTGCACCAGAATATGCTTATACTCTTCGGGTGAACGAAAAGAGTGATATTTATAGCTTTGGTGTGGTCATTTTGGAGTTGGTAACCGGGAAACCTCCAATTGATCCAGAGAATGGGGAAAAAGATCTGGTGAATTGGGTTTCCTCCACATTAGAACATGAAGCACAGAATCATGTGATTGATTCCACACTTGATTTGAAATACAAGGAAGAAATCAGCAAGGTGCTGAGCATAGGGCTTCTCTGCACAAGCTCAATTCCTATAAATCGCCCTTCAATGCGTAGAGTGGTGAAAATGCTGCAGGAAGCAACTGCAGTTCCCAAATCCAGAAGTGGAAAACTCGCTCCTTACTATCAAGAAGATGCTTAG 3051 0.4854 MHLYQSPSTLNSNLHESQTLTLTHHLTTISQYHTHIVEAVMSTITMLKLLFLNVLLSLSFSVSLNQEGLFLLKAKLHLSDPSNFLSNWNPTDTTPCNWTGVSCHPISAAVTSLHLDNSQLSGHFPTTLCRLPSLTSLSLSNNNLNSSLSTTALSACTSLNHLNLSLNLFSGPIPDTLPNLPHLRLLDLSFNNFSGSIPTTFGNFQHLHSLSLVSNLLTGTIPATLGNISTLQELHLAYNNLLTGTIPASLGNLTNLEDLWLAGCNLAGPIPVSLGNLSRLRNLDLSQNMLTGTLLEALFAELNSIVQIEIYQNSLSGELPRAGIVNLTRLERFDASYNELTGTIPDEFCKLKKLGSLYLDVNQLQGSLPECIAGSESLYELMLFNNTLSGELPNDLGSNSQLEIIDVSYNRFSGEIPASLCWRGALQELLLLHNSFSGGIPMSLGNCTSLTRVRIGNNNLSGVVPDGIWGLPHLRLLELVENSLSGSISNAISGAQNLSILLLSKNQFSGLIPEAIGSLNNLGEFVASHNSLTGSIPVSMTKLNQLGRLVLRDNQLSGEIPQGVGDWKKLNELDLANNRLGGNIPNELGTLPGLNFLDLSGNLLSGEIPIELQNLKLDFLNLSNNQLSGEIPPLYANENYKESFLGNTGLCGDLPGLCPGLGESRNKKYAWILWFIFVLAGIVLITGVAWFYFKFKNFKKMKKGFKISKWRSFHKLGFSEHEIVKLMSEDNVIGSGASGKVYKVVLSNAEVVAVKKLWGATNGIDGFEAEVETLGKIRHKNIVRLWCCCSSGDSKLLVYEYMPNGSLADLLHSSKKNLLDWPTRYKIAFDAAEGLSYLHHDCAPPIVHRDVKSSNILLDGEFGAKVADFGVAKIVRGVNQGAESMSVIAGSYGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGKPPIDPENGEKDLVNWVSSTLEHEAQNHVIDSTLDLKYKEEISKVLSIGLLCTSSIPINRPSMRRVVKMLQEATAVPKSRSGKLAPYYQEDA* 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1269 1016 SMART serkin_6 727 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g1269 1016 ProSitePatterns Serine/Threonine protein kinases active-site signature. 846 858 IPR008271 GO:0004672|GO:0006468
Lja3g1269 1016 Gene3D Ribonuclease Inhibitor 224 301 IPR032675 -
Lja3g1269 1016 ProSiteProfiles Protein kinase domain profile. 727 998 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g1269 1016 SUPERFAMILY RNI-like 324 633 - -
Lja3g1269 1016 Gene3D Transferase(Phosphotransferase) domain 1 802 1007 - -
Lja3g1269 1016 Gene3D Ribonuclease Inhibitor 64 223 IPR032675 -
Lja3g1269 1016 Pfam Leucine rich repeat N-terminal domain 65 103 IPR013210 -
Lja3g1269 1016 Pfam Protein kinase domain 729 990 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g1269 1016 SUPERFAMILY L domain-like 79 419 - -
Lja3g1269 1016 Pfam Leucine rich repeat 132 193 IPR001611 GO:0005515
Lja3g1269 1016 ProSitePatterns Protein kinases ATP-binding region signature. 733 756 IPR017441 GO:0005524
Lja3g1269 1016 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 48 1007 - -
Lja3g1269 1016 SMART LRR_typ_2 180 203 IPR003591 -
Lja3g1269 1016 SMART LRR_typ_2 351 374 IPR003591 -
Lja3g1269 1016 SMART LRR_typ_2 591 614 IPR003591 -
Lja3g1269 1016 SMART LRR_typ_2 471 494 IPR003591 -
Lja3g1269 1016 SMART LRR_typ_2 228 253 IPR003591 -
Lja3g1269 1016 SMART LRR_typ_2 543 567 IPR003591 -
Lja3g1269 1016 SMART LRR_typ_2 131 155 IPR003591 -
Lja3g1269 1016 SMART LRR_typ_2 277 301 IPR003591 -
Lja3g1269 1016 ProSiteProfiles Leucine-rich repeat profile. 616 638 IPR001611 GO:0005515
Lja3g1269 1016 Gene3D Ribonuclease Inhibitor 302 659 IPR032675 -
Lja3g1269 1016 SUPERFAMILY Protein kinase-like (PK-like) 727 994 IPR011009 -
Lja3g1269 1016 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 48 1007 - -
Lja3g1269 1016 Gene3D Phosphorylase Kinase; domain 1 699 801 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1269 Lja-Chr3 13330760 13334351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1269 63 1016 Receptor kinase-like Gene Family AT1G28440 58.673 0.0 1110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lja3g1269 Pkinase 7.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1269 - - gmx:100778128 1276.92