Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1256 ATGGCACAATTACCTCCAAAGGTTCCAACCATGTCACCAAGTTGGCCAGACTTCTCCTCCTCTCACCACCAAAAGATGCCATCAATGAATGGTGGCATCAACAATAATCACAACCCTTCCTGGGTGGATGAGTTTCTAGACTTCTCCTCGGCGCGGCGGGGCGCTCACAGGCGGTCGGTGAGCGACCCCGTCGCGTTCCTGGAGATGCCAATGCTGGACAAGCACGGCGGCAGGAACAATGTCCACGATGATGGGGAGTTCGACAAGTTTGATGATGAACAATTCATGTCCATGTTCAATGATGAGATCTCTGGGGTCCACAATATGCCGCCGCCGCCGCCAACAAAAACAGCAACGTTGTCCACCTCCAACCCTTCAAGCCCTGAGGAGCAGAATTTCGTCAATGATGAGAAAGAGACCAAGAAGGAGGTGGAGGAGCAAAAGAAGAAGGAAGAGGAGGAGGAGGAGGAAGAAGAAGAAGAAGAGGCGTGCCATCACCTGCAGCAACAATTGAAAAATGAACCGGATGAGGTTGAAAGCCAATGCGAACAGGAAAATCCACAGGGTTCAAATAACACCAGTGCTACTAATTCTTCCAATGATAGAATTACTGACCCCAAGAGAGTCAAAAGAATCTTAGCAAACAGACAATCTGCACAAAGATCGCGAGTGAGGAAGCTGCAGTACATATCAGAGCTTGAGCGAAGTGTAACTTCATTGCAGGCTGAAGTTTCAGTGCTGTCTCCCCGGGTTGCATATTTGGATCACCAACGCTTGCTTCTAAATGTTGACAACAGTGCTCTCAAGCAAAGAATCGCTGCCCTTGCTCAAGACAAGATCTTCAAAGATGCACATCAAGACGCACTGAAGAGGGAGATAGAGAGACTGAGGCAAGTGTATCACCAGCAGAGCCTCAAGAAGATGGAAAATGCTGCAGCAGGGTCACCTTTACCTTCCCCATCAACAAAGCCAACAATGTGTGATAATACTACTCACACAGAAAAGGAACAGCAGCTTCTTCACGCATGA 1029 0.4859 MAQLPPKVPTMSPSWPDFSSSHHQKMPSMNGGINNNHNPSWVDEFLDFSSARRGAHRRSVSDPVAFLEMPMLDKHGGRNNVHDDGEFDKFDDEQFMSMFNDEISGVHNMPPPPPTKTATLSTSNPSSPEEQNFVNDEKETKKEVEEQKKKEEEEEEEEEEEEACHHLQQQLKNEPDEVESQCEQENPQGSNNTSATNSSNDRITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAYLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQDALKREIERLRQVYHQQSLKKMENAAAGSPLPSPSTKPTMCDNTTHTEKEQQLLHA* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1256 342 MobiDBLite consensus disorder prediction 1 35 - -
Lja3g1256 342 MobiDBLite consensus disorder prediction 306 342 - -
Lja3g1256 342 MobiDBLite consensus disorder prediction 163 179 - -
Lja3g1256 342 MobiDBLite consensus disorder prediction 13 35 - -
Lja3g1256 342 PANTHER BASIC LEUCINE ZIPPER 34 1 340 - -
Lja3g1256 342 Coils Coil 286 306 - -
Lja3g1256 342 Pfam bZIP transcription factor 207 253 IPR004827 GO:0003700|GO:0006355
Lja3g1256 342 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 205 257 IPR004827 GO:0003700|GO:0006355
Lja3g1256 342 MobiDBLite consensus disorder prediction 103 208 - -
Lja3g1256 342 MobiDBLite consensus disorder prediction 132 149 - -
Lja3g1256 342 Gene3D - 206 280 - -
Lja3g1256 342 Coils Coil 134 170 - -
Lja3g1256 342 MobiDBLite consensus disorder prediction 182 202 - -
Lja3g1256 342 SUPERFAMILY Leucine zipper domain 207 261 IPR046347 GO:0003700|GO:0006355
Lja3g1256 342 MobiDBLite consensus disorder prediction 306 333 - -
Lja3g1256 342 SMART brlzneu 203 267 IPR004827 GO:0003700|GO:0006355
Lja3g1256 342 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 210 225 IPR004827 GO:0003700|GO:0006355
Lja3g1256 342 CDD bZIP_plant_RF2 208 258 IPR044759 GO:0003700|GO:0006355
Lja3g1256 342 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 1 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1256 Lja-Chr3 13237519 13240824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1256 1 285 bZIP Transcription Factor Family AT3G58120 55.034 2.06e-94 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lja3g1256 bZIP_1 3e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1256 - - cam:101507538 421.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1256 3 13237519 13240824 Lja3g1256 3 13237519 13240824 ECH