Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1211 ATGTCCAAGTTTCAAAAACAACCTGCAAGTAGAAGGCTAAGGCCTCAGCCCTTGCCTGAGTTCAAGATGGGGAGAAAATTGCTGGTGATTTACGACGACCCTCATGCAACTGAATCATCTGATGATGAGTCTCAGTCAGTGCCAACTGAGAAGAAGCTGGGGAAAATCAAAAGATGCATCACTGAGATTCCGCTTCCTCCTCTTGTTCCTGTCATCTCTGGCTCTGCTGGAACTAGCTCCTTTGCTGAGAAGAGAATCAACATGAGCAGTAAAAATGTTGAGGTTCACAACAAGAAGAGGGTTTCAACCCAGAACCCTTCAACAAGTTGGCAACCCTATTGCAAACTCAGAGGTGTTCGACTTAGGAAGTCAGGGAAATGGGGGTCAGGCACTTACAACACTGCTGAAGAGGCTTCCCAAGCCTATGAGTCCATGAGGCTCGAAATTGAAGCCATGACAAAGGCTCGGGTTCCCAACAATGGATCCTCTGATAAGGGTCCTGCTTCAAACTCTTCCTCTGCTGATGCTGAAGTTGCTGAAGGTTCTGCATCAGAGAAACCTTCTGTTGAGGCCAATGATATGGTTGCTGAATTGGCTGGTCTAGAAATACCAGACTTGAGTCTTCTGAACTTGCCTCCAACACCACCTGCTGCTGCTGTTGTTCCAACTGGCTCTAAGCCAAACCCTGTGCTTGATATTGATTTCTTAGCTGATTATGCAGGACAGGGCTTTGATGATGATACCAACCTTGGTGGTTGCCTGGAGGATATCCCAATTTTTGGGGTTGATAACAACGAGCCTAGTCAGCTTCCTGATTTCAATTTTGGTGATTTTGATTCTGATGGGTTTGCTGGTTGA 858 0.4639 MSKFQKQPASRRLRPQPLPEFKMGRKLLVIYDDPHATESSDDESQSVPTEKKLGKIKRCITEIPLPPLVPVISGSAGTSSFAEKRINMSSKNVEVHNKKRVSTQNPSTSWQPYCKLRGVRLRKSGKWGSGTYNTAEEASQAYESMRLEIEAMTKARVPNNGSSDKGPASNSSSADAEVAEGSASEKPSVEANDMVAELAGLEIPDLSLLNLPPTPPAAAVVPTGSKPNPVLDIDFLADYAGQGFDDDTNLGGCLEDIPIFGVDNNEPSQLPDFNFGDFDSDGFAG* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1211 285 MobiDBLite consensus disorder prediction 156 189 - -
Lja3g1211 285 MobiDBLite consensus disorder prediction 156 178 - -
Lja3g1211 285 MobiDBLite consensus disorder prediction 1 20 - -
Lja3g1211 285 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF119 23 180 - -
Lja3g1211 285 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 177 272 - -
Lja3g1211 285 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 23 180 - -
Lja3g1211 285 PIRSF PTI6 3 200 IPR017392 GO:0003700
Lja3g1211 285 PIRSF PTI6 240 284 IPR017392 GO:0003700
Lja3g1211 285 MobiDBLite consensus disorder prediction 32 52 - -
Lja3g1211 285 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF119 177 272 - -
Lja3g1211 285 Coils Coil 135 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1211 Lja-Chr3 12761062 12761919 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1211 25 277 AP2-EREBP Transcription Factor Family AT1G68550 30.526 6.30e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1211 - - lja:Lj2g3v2902380.1 464.536