Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1203 ATGGCGTCTGGATCCTCTGGTCGCGGTAACTCAGCCTCCAAAGGCTTCGATTTCGCTTCCGATGATATTCTTTGCTCCTACGATGACTTCCCCAACAGGGATTCCAATTCCAATGGCAATCACGCCGATCCCGCCAATTCAACTAAGGATTTTCACAAATCAAGGTTGTCTAGGACATCTGTGTTTCCTGCTACTTCCTATAATCCACCTGAAGATTCTTTAAGCCAAGATGTGATTGCAACTGTAGAGAAGAGTATGAAAAAATATACGGACAACCTCATGCGGTTTCTGGAGGGGATTAGTTCGAGGCTTTCACAGTTGGAATTATATTGCTACAATCTTGACAAATCTATTGGAGAAATGAAATCTGAATTGAATCGTGACCACGGGGAGCAAGATTCAAAGCTGAAATCTCTTGAAAAGCACCTTCAAGAAGTTCACAGGTCTGTACAAATTTTAAGAGACAAGCAAGAGCTAGCTGAGACTCAGAAAGAATTAGCCAAGCTTCAACTCGCTCAGAAAGAATCATCTTCATCGAGCCATTCGCAGTCCAATGAGGACAAATCTCCTTCTACTACAGATTCTAAAAAAGCTGATAATGCATCTGATGCATCCAACCAGCAGTTAGCTCTTGCCCTGCCCAATCAAATTGCCCCTCAGCCTCAGCCTGCAGCAGCCCAGCCCCAAGCTCCTGCTCCAAATGTGACTCAGGCCCCTCAACAACCTGCCTATTACATACCATCCACCCCTTTGCCTGGCAATACTCAAACCGTGGCCCAGCTTCCCCAGAATCAGTATTTACCTCCTGATCAACAATATCGAACACCCCAAATGCAAGATATGTCCCGGGTGGCTCCACAACCTGCACCATCTCAGGTAAGCCCGCCTCCACCTGTGCAGCAATATCCTCAGTATCAGCAACCACAGCAACAGCAGCAGCAGCAGCAACAACAACAACAATGGCCCCAGCAGTTACCTCAGCAGGTGCAGCCTACACAACCACCCTCAATGCAATCACCTCAAATAAGACCCCCCTCGTCACCTGTGTATCCTCCTTACCAGCCAAGTCAAGCAACAAATCCATCAAACCCAGAAACAATGCCAAACAGCATGCCGATGCAGATGCCATATTCAGGGGTTCCACCACCAGGGTCCAGCCGCGCTGATTCTGCGCCATATGGATATGGAGGAGGTGGTAGACCAGTTCCACAGCAACCTCCACCACAGCAAATCAAGAGTTCTTTCCCTGCACAACCAGGTGACATGTATGGAAATAGTGGGAACCACCCTTCACTCTCTCCTCCTGGCAATGCATACATGATGTATGATGGTGAGGGAGGAAGAGCACATCACCCATCCCAACCTCCTCATTTTGCCCAATCTGGATATCCACCAACAAGTGCTTCTCTTCAGAACCCTGCAGGTCATAATATCATGGTTCGAAATCCTAACCCGACACAATTTGTTCGCAACCATCCTTACAGTGACTTGATTGAGAAGTTGGTGAGCATGGGATTCAGGGGTGAACATGTGGTAAGCGTGATCCAGAGGATGGAGGAGAGTGGACAGCCTATAGATTTCAACTCTGTTCTTGACAGGTTAAATGTGCATGGCTCTGTGGGTCCTCAGAGAGGATGGTCTGGGTGA 1647 0.4797 MASGSSGRGNSASKGFDFASDDILCSYDDFPNRDSNSNGNHADPANSTKDFHKSRLSRTSVFPATSYNPPEDSLSQDVIATVEKSMKKYTDNLMRFLEGISSRLSQLELYCYNLDKSIGEMKSELNRDHGEQDSKLKSLEKHLQEVHRSVQILRDKQELAETQKELAKLQLAQKESSSSSHSQSNEDKSPSTTDSKKADNASDASNQQLALALPNQIAPQPQPAAAQPQAPAPNVTQAPQQPAYYIPSTPLPGNTQTVAQLPQNQYLPPDQQYRTPQMQDMSRVAPQPAPSQVSPPPPVQQYPQYQQPQQQQQQQQQQQQWPQQLPQQVQPTQPPSMQSPQIRPPSSPVYPPYQPSQATNPSNPETMPNSMPMQMPYSGVPPPGSSRADSAPYGYGGGGRPVPQQPPPQQIKSSFPAQPGDMYGNSGNHPSLSPPGNAYMMYDGEGGRAHHPSQPPHFAQSGYPPTSASLQNPAGHNIMVRNPNPTQFVRNHPYSDLIEKLVSMGFRGEHVVSVIQRMEESGQPIDFNSVLDRLNVHGSVGPQRGWSG* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1203 548 MobiDBLite consensus disorder prediction 30 45 - -
Lja3g1203 548 MobiDBLite consensus disorder prediction 219 288 - -
Lja3g1203 548 MobiDBLite consensus disorder prediction 337 358 - -
Lja3g1203 548 Coils Coil 136 172 - -
Lja3g1203 548 MobiDBLite consensus disorder prediction 219 435 - -
Lja3g1203 548 MobiDBLite consensus disorder prediction 359 373 - -
Lja3g1203 548 MobiDBLite consensus disorder prediction 414 433 - -
Lja3g1203 548 MobiDBLite consensus disorder prediction 304 336 - -
Lja3g1203 548 MobiDBLite consensus disorder prediction 30 55 - -
Lja3g1203 548 MobiDBLite consensus disorder prediction 169 204 - -
Lja3g1203 548 MobiDBLite consensus disorder prediction 289 303 - -
Lja3g1203 548 PANTHER FORMIN-LIKE PROTEIN (DUF1421) 1 546 - -
Lja3g1203 548 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 546 - -
Lja3g1203 548 Pfam UBA-like domain (DUF1421) 494 538 IPR010820 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1203 Lja-Chr3 12671799 12678386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1203 11 186 Trihelix Transcription Factor Family AT5G14540 30.508 4.29e-22 98.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1203 3 12671799 12678386 Lja3g1203 3 12671799 12678386 ECH