Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1167 ATGGGTTGGAAGAGATCTACTTTGGAGTGTGAGAGATTGAAGATCCATGGAAATGTTCTACTGGGAATTTTGTTGATCTGCACAATTCAGATTTCATGTGCGCTCACTGATCCCACAGATGTTGCTGCAATTAATAGCTTATACGCTGCTCTGGGGTCCCCTGCTCTCCCTGGTTGGGTTCCAAGTGGCGGAGATCCATGCGGAGAAGGGTGGCAAGGCATTCAGTGTAATGGTTCATTCATACAAAAAATAGTTCTGAATGGTGCAAATTTGGGAGGAGAACTGGGTGATAATCTGTCAACATTTGTTACAATCTCAGTAATTGATCTGAGCAACAACAACATTGGAGGAAGTATTCCATCCAGTTTGCCAGTTACCATGAGAAACTTTTTTCTTGCGGCCAACCAGTTCACCGGAAGTATTCCGACCTCTTTATCCACTTTAACTGGACTGACAGACATGTCTCTTAACGAAAACCATTTAAGTGGAGAAATACCAGATGCATTTCAGTCACTTACGCAGTTGATCAACCTAGATTTATCTACTAATAATTTGAGCGGGGAATTGCCTCCTTCCGTGGAGAATTTGTCAGCTCTAACCACCCTGCGCTTACAGAACAATCAGCTGTCTGGGACACTTGATGTTTTACAAGATCTTCCTCTGCAAGATTTGAATGTTGAGAACAACCAGTTTGCTGGCCCAATACCTCCAAAGTTGCTAAACATCCCAAAATTCAGACAAGCTGGAAATCCATTTAATGTTAATGCTACTGCAGCTGTTGCTCCTCCACCTCGCTCCCCAGTGACAGCACCGCCAGGAACACCAGTTTCTGGGGGAACACCAGTTTCTGGGGGACCACCAGTTTCTGGGGTACCATCTTCTGGCCGTGTACCTACTAAACAGGCTGATGGACCCACTGTAGCAAATGAACCACATTCTGTGAAATCCAAAAAACACACCAAAAGGGTGGTTTGGATATCTATTGCTAGTGTAATAGGATTCATTATTTTGGTACTAGCACTAATTCTATTTATTCCAAGATGCGGCCAAAGGAGAAGGGAACAGAATGACAGAAGGTCCAAGCGACATCAAATTGGTGCAGTGGGAGGTGAAAGACAAAATGCTAGGGATTATGGGGCTCTAGTCCAACCACCTCGTCAAACAGAAAAAGTACCACCAGCAGCGGATGTTTCAAAGCAGAAAGAGGATAATCAAGCAGAGACCAGGAGAGTGTGGGCTATTCCAAATCGGGAGCATGAGCAAGAGAAGGATGTGCAAAGAATGGTATCAATACCAAAGCCAGAAGATCATGAGATAGATATAAGTACACTAGAAGTGTATTCAATGCCTCCCCCGCCTCCTCCCCCTCCCCCTCCTCCTCCCCCTCCACCCACACCTCCACCACCACCACCTCCTCCTCCTACTAGGAAGGTGATTGTTGAGCCTGTCACTCACCGCAGAGGGACTAATGCCGATCCACCCACAAGAAGTTCAGTTCCTCCTCCCACTTTTGCAAAATGTTTCACCATTGCATCACTTCAACAATACACAAATAGCTTTTCTCAAGAAAATCTCATAGGAGGAGGGATGCTGGGAAGCGTGTATAAAGCAGAGCTTCCTAATGGGAAGCTACTTGCTGTGAAGAAACTGGATAAGAGAGCCTCTGCTCACCAGAAGGATGATGAGTTTCTTGAATTGGTGAATAGTATTGACAGAATACGACATGCAAATATTGTTGAGCTTATTGGATACTGTTCAGAGCATGGCCAAAGGCTTCTGATCTATGAGTACTGCAGTAATGGATCACTGCATGATGCACTCCACTCAGATGATGAATTCAAAACAAAACTCTCATGGAATGCTCGAATTCGGATGGCACTTGGAGCAGCTAGAGCCTTAGAATACTTGCATGAGCTATGTCATCCGCCGGTGATACATAGAGATTTGAAGTCTGCCAATATTCTCCTTGACGAGGATCTATCTGTGCGTGTATCTGATTGTGGCTTAGCTCCACTAATAACTTCGGGATCTGTAAGTCAGCTCTCGGGGAACCTGCTGACAGCTTATGGCTATGGAGCTCCAGAATTCGAGTCAGGAATTTACACATACCAAAGTGATGTATACAGCTTTGGAGTGATTATGTTAGAACTTATGACTGGCCGTCAGTCCCATGACAGGACGCGTCCGCGAGGGGAGCAATTTCTTGTCAGATGGGCAATTCCCCGACTTCATGATATTGATGCATTATCAAGCATGGTTGATCCTTCTTTAAATGGAGATTACCCTGCAAAATCATTGTCAAATTTTGCAGACATTATTTCTAGGTGCCTTCAGTCAGAACCAGAATTTAGGCCAGCAATGTCAGAGGTGGTCATGTACTTGATAAATATGATAAAGAAGGAGTCTCAGTAA 2412 0.4469 MGWKRSTLECERLKIHGNVLLGILLICTIQISCALTDPTDVAAINSLYAALGSPALPGWVPSGGDPCGEGWQGIQCNGSFIQKIVLNGANLGGELGDNLSTFVTISVIDLSNNNIGGSIPSSLPVTMRNFFLAANQFTGSIPTSLSTLTGLTDMSLNENHLSGEIPDAFQSLTQLINLDLSTNNLSGELPPSVENLSALTTLRLQNNQLSGTLDVLQDLPLQDLNVENNQFAGPIPPKLLNIPKFRQAGNPFNVNATAAVAPPPRSPVTAPPGTPVSGGTPVSGGPPVSGVPSSGRVPTKQADGPTVANEPHSVKSKKHTKRVVWISIASVIGFIILVLALILFIPRCGQRRREQNDRRSKRHQIGAVGGERQNARDYGALVQPPRQTEKVPPAADVSKQKEDNQAETRRVWAIPNREHEQEKDVQRMVSIPKPEDHEIDISTLEVYSMPPPPPPPPPPPPPPPTPPPPPPPPPTRKVIVEPVTHRRGTNADPPTRSSVPPPTFAKCFTIASLQQYTNSFSQENLIGGGMLGSVYKAELPNGKLLAVKKLDKRASAHQKDDEFLELVNSIDRIRHANIVELIGYCSEHGQRLLIYEYCSNGSLHDALHSDDEFKTKLSWNARIRMALGAARALEYLHELCHPPVIHRDLKSANILLDEDLSVRVSDCGLAPLITSGSVSQLSGNLLTAYGYGAPEFESGIYTYQSDVYSFGVIMLELMTGRQSHDRTRPRGEQFLVRWAIPRLHDIDALSSMVDPSLNGDYPAKSLSNFADIISRCLQSEPEFRPAMSEVVMYLINMIKKESQ* 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1167 803 MobiDBLite consensus disorder prediction 351 366 - -
Lja3g1167 803 SMART serkin_6 520 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g1167 803 SUPERFAMILY L domain-like 36 244 - -
Lja3g1167 803 MobiDBLite consensus disorder prediction 351 426 - -
Lja3g1167 803 SUPERFAMILY Formin homology 2 domain (FH2 domain) 455 461 - -
Lja3g1167 803 SUPERFAMILY Protein kinase-like (PK-like) 495 794 IPR011009 -
Lja3g1167 803 Pfam Leucine rich repeat N-terminal domain 38 77 IPR013210 -
Lja3g1167 803 Gene3D Phosphorylase Kinase; domain 1 491 597 - -
Lja3g1167 803 ProSitePatterns Serine/Threonine protein kinases active-site signature. 644 656 IPR008271 GO:0004672|GO:0006468
Lja3g1167 803 Gene3D Ribonuclease Inhibitor 37 255 IPR032675 -
Lja3g1167 803 MobiDBLite consensus disorder prediction 395 426 - -
Lja3g1167 803 Pfam Protein tyrosine and serine/threonine kinase 523 793 IPR001245 GO:0004672|GO:0006468
Lja3g1167 803 PANTHER OS01G0253100 PROTEIN 25 802 IPR045271 GO:0004714|GO:0006468
Lja3g1167 803 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED 25 802 - -
Lja3g1167 803 MobiDBLite consensus disorder prediction 445 478 - -
Lja3g1167 803 MobiDBLite consensus disorder prediction 447 478 - -
Lja3g1167 803 MobiDBLite consensus disorder prediction 256 319 - -
Lja3g1167 803 ProSiteProfiles Protein kinase domain profile. 520 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g1167 803 Gene3D Transferase(Phosphotransferase) domain 1 598 803 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1167 Lja-Chr3 12104531 12112479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1167 31 801 Strubbelig Receptor Gene Family AT4G03390 61.568 0.0 877
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lja3g1167 PK_Tyr_Ser-Thr 2.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1167 - - mtr:MTR_4g046113 1126.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1167 3 12104531 12112479 Lja3g1167 3 12104531 12112479 ECH