Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1164 ATGGCGACTGGGTTAGAGAGGGAAAGTGGGTTCACATTGTTCAGCGATGAAGAGCTGAGCGAGGTGTGTGGGGTGAAGCGTGTTGGGAACTGTGTTGAAGTCACGTGTGGGTGTACCAGCCATAGGTACGGTGATGCTGTTGGAAGGCTTAGGGTTTTCGCTAATGGGGACCTCGAAATCAGTTGTGAATGCACCCCTGGTTGCACAGAAGACAAGTTGACTCCTGCTGCATTTGAAAAGCACTCTGGGAGAGAGACAGCTAAGAAATGGAAGAATAATATCTGGGTAATAGTTGACGGTGAGAAGGTTCCATTATATAAAACGGTGCTGCTCAAATACTACAACCAAGTCTCAAGAGGTGCTAATGGGTCTAATAAACACCAAAATGGTCACCGTGATGAGTTTGTTCGCTGTACTAGTTGCAATAAAGAGAGGAGATTCCGTCTGAGGACTAAAGAGGAATGCCGCATTCACCATGATGCTGTGGCAGATGCGAATTGGAAATGTTCTGATCTGCCATATGACAAAGTTACATGTGATAATGAGGAAGAACGAGCAAGTCGTAGAGTTTACAGGGGATGCAACCGCTCTCCAACATGCAAAGGTTGCACTTCATGTGTGTGCTTTGGGTGTGATGTCTGCCGTTTTTCAGATTGCAGCTGCCAGACTTGTACTGACTTTACAACCAATGCCAAAGCTTGA 702 0.463 MATGLERESGFTLFSDEELSEVCGVKRVGNCVEVTCGCTSHRYGDAVGRLRVFANGDLEISCECTPGCTEDKLTPAAFEKHSGRETAKKWKNNIWVIVDGEKVPLYKTVLLKYYNQVSRGANGSNKHQNGHRDEFVRCTSCNKERRFRLRTKEECRIHHDAVADANWKCSDLPYDKVTCDNEEERASRRVYRGCNRSPTCKGCTSCVCFGCDVCRFSDCSCQTCTDFTTNAKA* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1164 233 PANTHER PROTEIN ULTRAPETALA 1 1 232 IPR020533 -
Lja3g1164 233 Gene3D - 22 113 IPR010919 -
Lja3g1164 233 ProSiteProfiles SAND domain profile. 20 105 IPR000770 GO:0003677
Lja3g1164 233 PANTHER PROTEIN ULTRAPETALA 1 1 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1164 Lja-Chr3 12082758 12086750 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF ULT Lja3g1164 SAND 1.6e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1164 - - gmx:100815782 446.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1164 3 12082758 12086750 Lja3g1164 3 12082758 12086750 ECH