Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1157 ATGGCAGCTTCTTCCTTCTTCAACAGAGTCTCCAAGGCTCTCAACTCTTCACCTTCCTCCTACAAACTCGTGCTTCTCTGCACTCTCACTCTCAGTGGTGGAGGTGTGGTGGCATACTCAGAATCACAATCAGAACCTCACCGAAAAAAGAAAGTGGTTGTTCTTGGAACAGGATGGGCTGCTACCAGTTTCCTGAAGGATTTGGATGTTTCTATATACGATGTCCAGGTTGTTTCGCCTCGTAACTACTTTGCATTTACTCCCTTGTTACCCAGTGTCACTTGTGGGACAGTTGAAGCACGCAGCATCGTCGAGCCAGTCCGAAACATCATAAAAAAGCGAAAAGGAGAAATAAAATTTTGGGAGGCAGAATGTGTCAAGATTGATGCTGCAAACAAAAAGGTTTCCTGTCGGTCCAATATTGACAACTTAGTGGGTAGTGGTGAATTTTCTCTCGACTATGACTTATTGGTCGTAGCCGTAGGAGCACAAGTAAATACTTTCAACACTCCTGGTGTCAAGGAGAACTGTCATTTTCTGAAGGATGTTGAGGATGCTCAGAAGATCAGGCTGTCTGTGATAGATTGCTTTGAGAAGGCTGTTCTTCCTAGCCAATCTGAAGAGGACCAAAGGTCAAATCTTCACTTTGTAGTTGTTGGAGGAGGTCCAACTGGTGTTGAGTTTGCTGCAGAGCTGCATGATTATGTCCAAGAAGATTTAATCCAGTTATATCCCACCGTTAAAGATTTAGTGAAGATAACTTTGATCCAATCAGGAGATCACATTTTGAATATGTTTGATGAAAGAATAAGTTCATTTGCTGAGAAGAAGTTTACCAGAGATGGTATAGAAGTTCAAACAGGATGCCGAGTTGTCAATGTTAATGACAAGGAAATTACAATGAAGGTGAAATCAACAGGAGAGGTTTGCTCTGTGCCCCATGGATTGATTGTCTGGTCCACTGGCATTTCAACTATTCCGGTTATAAGAGACTTTATGGAAGAAATTGGTCAGACTAAAAGGCATGTGCTAGCAACTGATGAATGGTTGCGAGTGAAGGGATGCGAAGCTGTGTACGCCGTTGGTGATTGTTCTACAATAGTTCAACGTAAAATCATGGATGATGTCTTGGCCATATTTGAGACTGCGGACAAAGATAACTCCGGTACCTTAACTGTTGAAGAATTCCAGGATGTTATGGATGACATTCTCTTAAGATACCCTCAAGTAGAACACTATCTAAAGAAGCAACATATATATGACTTTACCATGCTTTGGAAAGATTCACAAGGAAATGAAAGAAAAGAAATAGACATAGAAGGGTTTAAGCTGGCCCTTTCTCAAGCAGATTCACAGATGAAGACTCTGCCAGCAACTGCACAGCTAGATGTTTTAACAGCATGGATCATTGTGAACAACATCCTGAAGGTCCTCGACGCTTTACAGGATCTGGACATCATAGGTTTCTTCCTTTCCGGTACAAACATTTTGGGCAATTTGCTCCACTGGGTGGGGAGCAGGCAGCTGCAGAACTTCCTGGAGACTGGGTTTCCATTGGTCACACTTGGGATTTCACAATGCGTTGGTCTTCCTTCTATAACACAACCTCAAGGATTTTTCATGAGTATCCATCATGGTCCAAGTCTGTTGTTATATGCACTTGGTGGAGGTGTGGTGGCATATGCTGATGCCAAACCAGCACAAAGTGACAATGTTGGTCACAACCGGAAAAAGAAAGTGGTGGTTCTGGGAACTGGCTGGGCTGGAACCAGTTTTGTGAAAAACATGAAAAGCTCCTCCTATGATATTCATGTGGTTTCACCACGTAACTATTTTGCATTCACTCCTCTGCTACCAAGCGTCACTTGTGGCACAGTGGAGGCTCGCAGCGTTGTCGAACCGATTCGCAGCATCTCCCGGAAGAGTGGTCTAGATATTCAATTCAGTGAAGCTGAATGCTACAAGATCGATCCCAAGAACAACAAAGTTTACTGCCGTTCTGGTCAAGACAAAAAGCTAGGTGGCCCTGAAGAATTTTCCCTTGATTATGATTACTTGGTAATAGCAATGGGAGCACGTTCTAATACCTTCAACACACCTGGTGTTCAGGAGCATGCTCACTTCTTGAAGGAAGTGGAAGACGCTCAAAGAATCCGCCAAACAGTGATTAACCTTTTTGAAAGGGCAAGCCTCCCTTCTTTATCTGAGGAAGAGAAGAGAAAGCTTCTCAGTTTTGTAATTGTTGGTGGTGGTCCAACTGGGGTAGAGTTTGCTGCAGAGCTTCATGACTTTGTACATGAGGATCTATCTATATTGTACCCTTCTCTTAAAGACTATGTGAAGATTACTCTTCTGGAAGCAGGCGATCATATCTTAAACATGTTTGACAAGAGAATTACGGAATTTGCTGAAGAAAAGTTTTCCAGAGATGGAACTGATGTAAGGTTGGGATCTATGGTTGTCAAAGTTAGTGCAAATGAAATCTCTGCCAAAGAAAGAAGCACTGGTGAAGTTGTTTCTATACCTCATGGAATGGTAGTTTGGTCAACTGGTATTGGTCCTCGCCCTGAAATACTTGAGTTCATGAAGCAGCTTGGCCAGATTAACAGACGTGCAATTGTTACTGATGAATGGCTAAGGGTAGAAGGATGTGACAACATCTATGCTCTAGGTGATTGCGCCACTATAAATCAGCGTAGAGTTATGGAAGATATAGCTGTCATATTTAGCAAGGCAGACAAAGACAATTCTAGGACATTGGATATTAAAGAATTTCAAGACGTTGTTGGTGACATTATTGAGAGGTACCCACAAGTGGGGATTTATTTAAAGAAGAATCAAATGAAAGATATGGCTACCTTGCTAAACAAATCTCAGGAAAGCTCTCTTACAGTAGACATTGAGTACTTCAAAGAAGCACTTTCCAAAGTAGATTCCCAGATGAAAAATCTTCCTGCAACAGCTCAGGTAGCTTCTCAACAAGGCATATATCTTGCTGACTGTTTCAATCGCATGGAGTTGTGTGAGAAGTATCCTGAAGGCCCTCTTAGGTTCAGGGGTACAGGACGCCATCGGTTTCATCCCTTTAGGTACAAGCATTTTGGGCAATTTGCTCCTCTAGGAGGAGAACAAACTGCAGCTCAGCTTCCAGGAGATTGGATTTCAATTGGCCATAGTAGCCAATGGCTCTGGTATTCAGTATACACAAGCAAGCAAGTCAGCTGGAGAACAAGAGCTTTGGTGGTATCTGACTGGACAAGGCGATTCATATTTGGCAGGGACTCAAGCCGAATCTGA 3297 0.428 MAASSFFNRVSKALNSSPSSYKLVLLCTLTLSGGGVVAYSESQSEPHRKKKVVVLGTGWAATSFLKDLDVSIYDVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIIKKRKGEIKFWEAECVKIDAANKKVSCRSNIDNLVGSGEFSLDYDLLVVAVGAQVNTFNTPGVKENCHFLKDVEDAQKIRLSVIDCFEKAVLPSQSEEDQRSNLHFVVVGGGPTGVEFAAELHDYVQEDLIQLYPTVKDLVKITLIQSGDHILNMFDERISSFAEKKFTRDGIEVQTGCRVVNVNDKEITMKVKSTGEVCSVPHGLIVWSTGISTIPVIRDFMEEIGQTKRHVLATDEWLRVKGCEAVYAVGDCSTIVQRKIMDDVLAIFETADKDNSGTLTVEEFQDVMDDILLRYPQVEHYLKKQHIYDFTMLWKDSQGNERKEIDIEGFKLALSQADSQMKTLPATAQLDVLTAWIIVNNILKVLDALQDLDIIGFFLSGTNILGNLLHWVGSRQLQNFLETGFPLVTLGISQCVGLPSITQPQGFFMSIHHGPSLLLYALGGGVVAYADAKPAQSDNVGHNRKKKVVVLGTGWAGTSFVKNMKSSSYDIHVVSPRNYFAFTPLLPSVTCGTVEARSVVEPIRSISRKSGLDIQFSEAECYKIDPKNNKVYCRSGQDKKLGGPEEFSLDYDYLVIAMGARSNTFNTPGVQEHAHFLKEVEDAQRIRQTVINLFERASLPSLSEEEKRKLLSFVIVGGGPTGVEFAAELHDFVHEDLSILYPSLKDYVKITLLEAGDHILNMFDKRITEFAEEKFSRDGTDVRLGSMVVKVSANEISAKERSTGEVVSIPHGMVVWSTGIGPRPEILEFMKQLGQINRRAIVTDEWLRVEGCDNIYALGDCATINQRRVMEDIAVIFSKADKDNSRTLDIKEFQDVVGDIIERYPQVGIYLKKNQMKDMATLLNKSQESSLTVDIEYFKEALSKVDSQMKNLPATAQVASQQGIYLADCFNRMELCEKYPEGPLRFRGTGRHRFHPFRYKHFGQFAPLGGEQTAAQLPGDWISIGHSSQWLWYSVYTSKQVSWRTRALVVSDWTRRFIFGRDSSRI* 1099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1157 1098 PANTHER - 4 463 - -
Lja3g1157 1098 ProSiteProfiles EF-hand calcium-binding domain profile. 371 406 IPR002048 GO:0005509
Lja3g1157 1098 SUPERFAMILY FAD/NAD(P)-binding domain 214 368 IPR036188 -
Lja3g1157 1098 ProSitePatterns EF-hand calcium-binding domain. 384 396 IPR018247 -
Lja3g1157 1098 PRINTS FAD-dependent pyridine nucleotide reductase signature 744 762 - -
Lja3g1157 1098 PRINTS FAD-dependent pyridine nucleotide reductase signature 683 701 - -
Lja3g1157 1098 PRINTS FAD-dependent pyridine nucleotide reductase signature 872 894 - -
Lja3g1157 1098 PRINTS FAD-dependent pyridine nucleotide reductase signature 580 599 - -
Lja3g1157 1098 SUPERFAMILY FAD/NAD(P)-binding domain 577 796 IPR036188 -
Lja3g1157 1098 PANTHER NADH DEHYDROGENASE 549 1098 IPR045024 GO:0003954|GO:0006116
Lja3g1157 1098 Pfam Pyridine nucleotide-disulphide oxidoreductase 50 367 IPR023753 GO:0016491
Lja3g1157 1098 Gene3D - 943 1097 - -
Lja3g1157 1098 Gene3D - 40 390 - -
Lja3g1157 1098 Gene3D - 568 933 - -
Lja3g1157 1098 ProSiteProfiles EF-hand calcium-binding domain profile. 900 935 IPR002048 GO:0005509
Lja3g1157 1098 ProSitePatterns EF-hand calcium-binding domain. 913 925 IPR018247 -
Lja3g1157 1098 SMART efh_1 904 932 IPR002048 GO:0005509
Lja3g1157 1098 SMART efh_1 375 403 IPR002048 GO:0005509
Lja3g1157 1098 SUPERFAMILY FAD/NAD(P)-binding domain 740 897 IPR036188 -
Lja3g1157 1098 SUPERFAMILY EF-hand 371 972 IPR011992 -
Lja3g1157 1098 SUPERFAMILY FAD/NAD(P)-binding domain 49 267 IPR036188 -
Lja3g1157 1098 Pfam Pyridine nucleotide-disulphide oxidoreductase 578 903 IPR023753 GO:0016491
Lja3g1157 1098 PANTHER NADH DEHYDROGENASE 4 463 IPR045024 GO:0003954|GO:0006116
Lja3g1157 1098 PANTHER - 549 1098 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1157 Lja-Chr3 12014894 12026639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1157 1 462 Chloroplast and Mitochondria Gene Families AT4G21490 60.211 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1157 K03885 - gmx:100820044 937.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1157 3 12014894 12026639 Lja3g1157 3 12014894 12026639 ECH