Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1134 ATGGTGCATAACATCTTAATGGCATTTCTTTGGCTCTTATTATTATTCTCCCACATTTCAAAAACTTCCACTTCTTCCACTTCATTGGACACTTTAGCAGTGAACCAATCAATCCGAGATGGTGAGAGTCTACTTTCAGCAGGTGGAATCATTAAAATGGGTTTCTTCAGCCCCGGGAGTTCAAAAAGTCGATACTTGGGTGTATGGTATACGAATGTATCGCCTTTAACAGTGATATGGGTGGCCAACAGAGAAACACCTCTACTGAACAATTCAGGAGTGTTAAAGCTCAACGCAAAAGGGGTTCTTCAGCTTCTCAACGGTACTGCTAACAACACTATAATTTGGTCATCAAACAGAACAAGCAAAGCAGGGAATATGAATAATCTAATTGCTCATCTCCAGGATTCAGGAAATTTGGTAGTGAAAAATGGACAGGAAACTGATGACTTTTTGTGGCAGAGTTTTGATTATCCTAGTGATACATTGATGTCGGGAATGAAGCTTGGGTGGAACTTGGAAATTGGTCTAGAAAGATTCATATCATCATGGAAAAGTGCTGATGACCCTGCTGAGGGAGAATATGCTACCAAACTTGACCTCAGAGGATATCCACAGATAATGAGATTCAAGGGGTCTGATATAGTTACTAGAGCAGGGCCATGGCTAGGTGAGTTCATTGCAGGATCTCAAGGTCCAACTCCGGGAGCAGCACAGAGATTTGTGTTCAATGAAAAAGAAGTGTATTATGAGTACGACCGTAACGAAACCTCAACTATCGCCGTAAATAAACTGACTCCTTCAGGGGCTGCCCAGACTCTCTATTGGACCGTTGGATCGAGCAGCCAAAAAGTGTACTCAAATGGGGAGCTAGATCAATGTGAAGACTATGCCTATTGTGGTGCGAATTCTATATGCAGCATGGACGGTACCCTTCCAACTTGTGAGTGCTTGAAAGGGTATGTTCCCAAGATTCCTCAACAGTGGAAGTTGTCTCACTGGCAAAAGGGTTGTGTTCCAAGGAATGAATCTGATTGCAAAAACAGTCCTACGTACAAAACAAAGGGCTTCTTCAAGTACACACACGTGAAGTATCCAGACACTTCCTCATCATGGTTTAGTAAGACCATGAACCTTGAGGAATGTAAGATGTCGTGTTTGAGAAATTGTTCATGTGTAGCGTATGCAAATTTGGATACCCGCAATGGGGGGACTGGGTGTCTGCTTTGGTTTAATCATCTGGTTGACGCGAGGGAATTCACTCATTTGGGACAAGATCTTTATGTCAAAGTCCCTCTTTCAGAACTAGATCAAGTCACAACGGATGACCATGGAAACATCAAGAAGATAGTAGGAATCACAGTTGGTGTGGCTATTTTTGGATTAATAACATGTGGATTGATATTGATAATAAAAAATCCAGGGGCTGCAAGAAATGCTTTCTGCAAGCATTACAAAAAGAACCCGAGGAAGGAAGATGTTGATTTGTCAACATTCGATTTCTCAGTCTTAGCTTATGCCACTAACAATTTTTCAAGCAGTAACAAACTTGGAGAAGGTGGCTTTGGACCAGTATACAAGGGAATATTGATAGATGGACAAGAGATAGCTGTGAAAAGGCTTTCAAAAAGATCTGGACAAGGGTTGGACGAGTTTAAAAATGAAGTGGCACTGATTGCCAAACTTCAGCACCGTAATCTCATAAAGCTTCTTGGTTGTTGTATTCAAGGAGAAGAAACAATGTTGGTCTATGAATACATGCCCAACAAAAGCTTGGACAACTTTGTTTTTGATGAAACCAAAAGCATGTCACTAGATTGGCTTAAGCGTTTCAATATTATTGGTAGCATTGCTCGTGGACTTCTTTATCTTCATCAAGACTCAAGACTGAGGATTATCCACAGAGATCTAAAAGCTAGCAATATATTACTAGATGTAAATTTGGAACCAAAAATATCAGACTTCGGCTTGGCTCGAATATTTTGGGAGACCAAATCGAGGATAACACAAATAGAGTGGCTGGAACATATGGTTACATATCTCCAGAGTATGCTGTCCATGGGCATTTCTCAGTAA 2076 0.4094 MVHNILMAFLWLLLLFSHISKTSTSSTSLDTLAVNQSIRDGESLLSAGGIIKMGFFSPGSSKSRYLGVWYTNVSPLTVIWVANRETPLLNNSGVLKLNAKGVLQLLNGTANNTIIWSSNRTSKAGNMNNLIAHLQDSGNLVVKNGQETDDFLWQSFDYPSDTLMSGMKLGWNLEIGLERFISSWKSADDPAEGEYATKLDLRGYPQIMRFKGSDIVTRAGPWLGEFIAGSQGPTPGAAQRFVFNEKEVYYEYDRNETSTIAVNKLTPSGAAQTLYWTVGSSSQKVYSNGELDQCEDYAYCGANSICSMDGTLPTCECLKGYVPKIPQQWKLSHWQKGCVPRNESDCKNSPTYKTKGFFKYTHVKYPDTSSSWFSKTMNLEECKMSCLRNCSCVAYANLDTRNGGTGCLLWFNHLVDAREFTHLGQDLYVKVPLSELDQVTTDDHGNIKKIVGITVGVAIFGLITCGLILIIKNPGAARNAFCKHYKKNPRKEDVDLSTFDFSVLAYATNNFSSSNKLGEGGFGPVYKGILIDGQEIAVKRLSKRSGQGLDEFKNEVALIAKLQHRNLIKLLGCCIQGEETMLVYEYMPNKSLDNFVFDETKSMSLDWLKRFNIIGSIARGLLYLHQDSRLRIIHRDLKASNILLDVNLEPKISDFGLARIFWETKSRITQIEWLEHMVTYLQSMLSMGISQ* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1134 691 Gene3D Transferase(Phosphotransferase) domain 1 587 681 - -
Lja3g1134 691 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 190 IPR036426 -
Lja3g1134 691 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 23 664 - -
Lja3g1134 691 CDD PAN_AP_plant 344 432 - -
Lja3g1134 691 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 23 664 - -
Lja3g1134 691 Gene3D - 23 156 IPR036426 -
Lja3g1134 691 Pfam D-mannose binding lectin 77 185 IPR001480 -
Lja3g1134 691 ProSiteProfiles PAN/Apple domain profile. 346 432 IPR003609 -
Lja3g1134 691 CDD B_lectin 35 159 IPR001480 -
Lja3g1134 691 ProSiteProfiles Bulb-type lectin domain profile. 29 155 IPR001480 -
Lja3g1134 691 SMART ntp_6 352 431 IPR003609 -
Lja3g1134 691 Gene3D Hepatocyte Growth Factor 348 428 - -
Lja3g1134 691 Pfam Protein tyrosine and serine/threonine kinase 514 664 IPR001245 GO:0004672|GO:0006468
Lja3g1134 691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Lja3g1134 691 SUPERFAMILY Protein kinase-like (PK-like) 496 667 IPR011009 -
Lja3g1134 691 SMART serkin_6 511 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g1134 691 Gene3D Phosphorylase Kinase; domain 1 484 586 - -
Lja3g1134 691 ProSiteProfiles Protein kinase domain profile. 511 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g1134 691 ProSiteProfiles EGF-like domain profile. 290 327 IPR000742 -
Lja3g1134 691 SMART blect_4 35 159 IPR001480 -
Lja3g1134 691 Pfam PAN-like domain 353 416 IPR003609 -
Lja3g1134 691 Pfam S-locus glycoprotein domain 218 324 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1134 Lja-Chr3 11781150 11784745 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1134 437 661 Receptor kinase-like Gene Family AT4G23190 53.846 7.46e-74 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lja3g1134 PK_Tyr_Ser-Thr 2.7e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1134 - - gmx:100776576 887.486